Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2631 ATGGAACTTGAAGCAATTATAAGGGAACAAGTTGATCTGGAGAACATACCCATAGAGGAAGTCTTTGAAAATCTAAAATGCACAAAAGAAGGACTAACCTCTGATCAAGTGAAAGAGAGGCTAGATTTGTTTGGACACAACAAGCTTGAAGAAAAGAAGGAAAGTAAAATACTCAAGTTTTTGGGCTTTATGTGGAATCCATTGTCATGGGTCATGGAAGCTGCTGCTATCATGGCCATTGCCATGGCTCATGGAGGGGGAGAAGGTTGGGATTATCAAGATTTTACCGGCATTGTTATACTGCTACTTGTAAACTCCACAATCAGTTTCATAGAAGAAAACAATGCTGGTAATGCAGCAGCAGCACTCATGGCAAGATTGGCCCCAAAAGCAAAGGTACTCCGTGATGGAAAATGGAGCGAAGAAGATGCATCTGTGTTGGTTCCTGGAGATATAATCAGCATCAAGCTAGGTGACATCATTCCTGCCGACGCACGCCTCCTTGAAGGAGATCCTTTGAAGATCGATCAGTCTGCTCTTACTGGAGAGTCACTTCCTGTTTCAAAACATCCTGGAGATGGAGTATATTCTGGTTCAACATGCAAGCAAGGAGAAATTGAAGCAGTAGTTATTGCAACTGGAGTTCACACATTCTTTGGAAAGGCGGCGCATCTTGTGGAAAACACCACACATGTTGGACATTTCCAGAAGGTTTTGCAATCTATTGGGAACTTCTGCATCTGTTCCATTGCTATTGGGATGCTCATTGAAATCATAGTGATATATGGCCCGCAGCAAAGGAAATACCGAGTTGGTATTGATAACCTCCTTGTGTTACTGATTGGCGGTATTCCTATTGCGATGCCAACTGTCCTTTCAGTTACAATGGCTATTGGTTCACACAAATTGTCTCAGCAGGGTGCTATAACAAAGAGAATGACTGCAATTGAAGAAATGGCCGGAATGGATGTTCTATGCAGTGATAAAACAGGCACATTAACTCTCAACAAGCTTACAGTGGACAAGAATCTAATTGAGGTCTTTGCTGATGGAGTTAATCAGGACATGGTTGTACTTATGGCTGCAAGGGCATCAAGGCTAGAGAACCAAGATGCAATTGATTGTGCAATTGTATCTATGTTAGCAGACCCAAAGGAGGCACGAGCTGGAATAACTGAAATTCACTTCCTTCCATTCAATCCAACAGATAAAAGAACCGCACTTACATACACCGATGCTGCTGGTAAGATGCACAGGGTTAGCAAAGGTGCACCAGAGCAGATTCTCAACCTTGCACATAACAAGTCAGAAATTGCACAGAGGGTACATGCAATTATAGACAAATTTGCCGAACGTGGCCTTCGCTCGCTGGCTGTTGCCCGCCAGGAAGTACCTGAGGGAACCAAAGAAAGTTTAGGGGGTCCGTGGGAATTTGTCGGCCTACTCCCACTATTTGATCCTCCCCGCCACGATAGCGCTGAAACAATCAGAAGAGCTCTTAATCTTGGTGTGAGTGTCAAAATGATCACTGGTGATCAGCTTGCAATTGCTAAGGAAACAGGAAGGCGTCTTGGAATGGGCTCTAACATGTATCCTTCTTCGTCGCTGCTAGGAGAAAGCAAAGATAATTTTGCTTCTGTTCCCGTTGATGATCTTATAGAGAATGCAGATGGTTTTGCTGGTGTCTTTCCTGAGCACAAATATGAGATTGTGAAGAGGTTACAAGCTAGAAAGCACATTTGTGGGATGACTGGTGATGGAGTGAATGATGCACCAGCTTTGAAGATAGCCGACATAGGTATCGCTGTAGCAGATGCCACAGACGCTGCAAGAAGTGCCTCTGACATAGTTCTAACAGAACCTGGGTTGAGTGTGATCATAAGTGCTGTTTTAACTAGCCGTGCAATTTTCCAAAGAATGAAAAACTACACAATATATGCTGTATCTATCACCATTCGTATTGTGGTTGGCTTTATGTTACTCACATGCATTTGGGAATTCAACTTTCCTCCCTTTATGGTTCTTGTCATAGCCATTCTCAACGATGGTACCATCATGACAATATCTAAAGATAGGGTTAAGCCTTCTCCAAGTCCTGATAGTTGGAAGCTGAGTGAGATTTTTGCAACTGGGATTGTCCTAGGAGGTTATCTGGCTCTAATGACAGTGATATTCTTCTGGGCAGCATATAAAACACATTTTTTTCCTAACCATTTTGATGTGAGACATCTCCACGAAGATCTTCATGGTCCACCTACTCATGAAGAGAGTAAAATGCTAGGAGCTGCTATATATCTTCAAATTGCAACTATTGTATCTGCCCTTCTCTCTTGGGAGCTAGCAGGAATCAAAGCCATAGGATGGGGTTGGACGGGAATCATCTGGGTCTACTCTATTATAACTTACTTATTTTTGGATCCTATAAAGTTTGCTGTTCGTTATGCATTAAGCGGAAGAGCTTGGAATTTGGTGGTAGACAAACATACTGCATTTATCAACAAAAATGACTTTGGTAGAGAAGCTCGTGAAGCTCAATGGGCTGCTGAGCAGAGAACCTTACATGGTCTCCAGTCTGCTGACATGAAAGTTGAGAAGCACACTTTCAGGGAAATAAATACACTAGCTGACGAGGCCAAGAGGCGTGCAGAAATAGCAAGGATGAGAGAGCTTCACACTCTGAAAGGAAGGGTGGAAACAATGGGCAAGCTAAAGGGTTTAGATGTGGATGCAATCAACAGTCATTACACAGTATAA 2754 0.4292 MELEAIIREQVDLENIPIEEVFENLKCTKEGLTSDQVKERLDLFGHNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIAMAHGGGEGWDYQDFTGIVILLLVNSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVSKHPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHFQKVLQSIGNFCICSIAIGMLIEIIVIYGPQQRKYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFADGVNQDMVVLMAARASRLENQDAIDCAIVSMLADPKEARAGITEIHFLPFNPTDKRTALTYTDAAGKMHRVSKGAPEQILNLAHNKSEIAQRVHAIIDKFAERGLRSLAVARQEVPEGTKESLGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGESKDNFASVPVDDLIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVGFMLLTCIWEFNFPPFMVLVIAILNDGTIMTISKDRVKPSPSPDSWKLSEIFATGIVLGGYLALMTVIFFWAAYKTHFFPNHFDVRHLHEDLHGPPTHEESKMLGAAIYLQIATIVSALLSWELAGIKAIGWGWTGIIWVYSIITYLFLDPIKFAVRYALSGRAWNLVVDKHTAFINKNDFGREAREAQWAAEQRTLHGLQSADMKVEKHTFREINTLADEAKRRAEIARMRELHTLKGRVETMGKLKGLDVDAINSHYTV* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2631 917 SUPERFAMILY Calcium ATPase, transduction domain A 129 226 IPR008250 -
Amo04g2631 917 PRINTS H+-transporting ATPase (proton pump) signature 556 572 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo04g2631 917 PRINTS H+-transporting ATPase (proton pump) signature 615 640 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo04g2631 917 PRINTS H+-transporting ATPase (proton pump) signature 584 600 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo04g2631 917 PRINTS H+-transporting ATPase (proton pump) signature 442 460 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo04g2631 917 Pfam E1-E2 ATPase 127 305 - -
Amo04g2631 917 PANTHER CALCIUM-TRANSPORTING ATPASE 3 776 - -
Amo04g2631 917 PANTHER CALCIUM-TRANSPORTING ATPASE 768 897 - -
Amo04g2631 917 PRINTS P-type cation-transporting ATPase superfamily signature 607 619 - -
Amo04g2631 917 PRINTS P-type cation-transporting ATPase superfamily signature 480 491 - -
Amo04g2631 917 PRINTS P-type cation-transporting ATPase superfamily signature 502 512 - -
Amo04g2631 917 PRINTS P-type cation-transporting ATPase superfamily signature 176 190 - -
Amo04g2631 917 PRINTS P-type cation-transporting ATPase superfamily signature 326 340 - -
Amo04g2631 917 PRINTS P-type cation-transporting ATPase superfamily signature 584 603 - -
Amo04g2631 917 PANTHER PLASMA MEMBRANE ATPASE 768 897 - -
Amo04g2631 917 Pfam Cation transporter/ATPase, N-terminus 15 78 IPR004014 -
Amo04g2631 917 SFLD p-type atpase 308 635 IPR044492 -
Amo04g2631 917 PANTHER PLASMA MEMBRANE ATPASE 3 776 - -
Amo04g2631 917 Gene3D - 91 771 - -
Amo04g2631 917 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 98 533 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo04g2631 917 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 559 664 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo04g2631 917 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 31 775 IPR006534 GO:0008553|GO:0016021|GO:0120029
Amo04g2631 917 Gene3D - 129 213 - -
Amo04g2631 917 Gene3D - 338 485 IPR023299 GO:0000166
Amo04g2631 917 SUPERFAMILY Calcium ATPase, transmembrane domain M 11 816 IPR023298 -
Amo04g2631 917 ProSitePatterns E1-E2 ATPases phosphorylation site. 328 334 IPR018303 -
Amo04g2631 917 Pfam haloacid dehalogenase-like hydrolase 322 598 - -
Amo04g2631 917 Gene3D - 866 917 - -
Amo04g2631 917 Gene3D - 323 621 IPR023214 -
Amo04g2631 917 SUPERFAMILY HAD-like 322 631 IPR036412 -
Amo04g2631 917 SMART Cation_ATPase_N_a_2 12 84 IPR004014 -
Amo04g2631 917 CDD P-type_ATPase_H 31 810 IPR006534 GO:0008553|GO:0016021|GO:0120029
Amo04g2631 917 SFLD Haloacid Dehalogenase 308 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2631 Amo-Chr4 99442096 99449423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2631 3 917 Primary Pumps ATPases AT5G62670 76.205 0.0 1449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2631 K01535 - rcu:8265793 1481.08