Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo04g2617 | ATGGAGCGAGTCGCGGAGCCAAAGGTGCTTCCTAGAACCATGCCAGTGTTGGTTGAGGTTTCTAATGGACACAAGGGGACAATAAGTGAAGCTATTCAGAGACTAAATGGAAGTGAGTTTTCATCAAGAGAAGTGAATGTGATGAATCAATTTTCTAAGGCAAGGGAAAGCCCTGTGACAAGGTTGGCATCCATCAAAGAAGTTGCTCAATTATCAAATGCAAGAGTTGTTTTGGTAAGAGAAGACATGGGATTTCAAGAACCAATCTCCCCTGCACCTACAAGAACATTGAAAGGAAAGGTCTCTTTGCCAGAATCAGAAGAAGGACTTAAGGCATCTTCTTTGGAAAGTGCTCCGAGTTCATTCGCCGGCGCTAGTCACCCCCCAGAGCCAGTTGATACTGATCTTATGAGAACTGTTTATGTACCAATTGGTCATAGCAAAGCCGAGGATGCGAGCTTAACAAAAAACATGTCCTTGCAGGGTCCTTTCCTAGAAGATCTAACCATTCGTGTTGCTACTAAGAAACCAACTCTGACTGTTCTTTCCCCTGCAGAAAGCATGGTTGAAGAATCAAATGGCACAGAGAACTTGTCCTCGCCTCAGAATACTGAACACTCTATCCCTCCCCCAGATTCTGAGGAGAAAGAATGTGTTTGGGATTCTTCTTTGCCCCCAACTCCAAGTGGTAATGTTAGTCCACATAGTAGTATTGATAGTAGTAGTGTTGTAAGAGCAATGAGCATTGCGAATAGTTGTGCGAGTACTTACCGGAGTGATGCATTCACAAGTGATGGCATGATTAGTTTAGACAGGAATTGTGATAGTACTAAGGGAAGTGTGAGTGTAAGAGGAGAATCTCTCGAGAGTGCGAAAACCAGCCCGAGTCGAGTGAGTGATAGCAGTGGTCTAAGCGATGACAGCAGCTGGAGTAACATCACTGGTGGTGCCAATAAGCCTCACAAAGGAAATGATCCAAGGTGGAACGCCATACTTGCTATCCGAGCACGCGATGGAATCTTGGGAATGAGTCACTTTAGGCTGCTGAAAAGGCTTGGTTGTGGTGATATTGGAAGCGTGTATCTCTCGGAGCTGAGCGCGACTCGGTGTTATTTTGCGATGAAGGTGATGGACAAGGCATCATTAGAGAGCAGAAAGAAGCTGAACAGGGCACAGACAGAAAGGGAGATACTGCAGCTGCTGGATCATCCATTCTTGCCAACTTTGTATACACATTTTGAGACTGATAGATTCTCGTGTTTGGTAATGGAATACTGTCCCGGGGGCGATCTACACACTTTAAGACAACGCCAACCAGGGAAACATTTCTCGGAGTATGCTGCACGATTTTATGCTGCCGAGGTTCTTCTGGCACTTGAGTATCTTCACATGCTTGGAGTAGTGTATCGCGACCTTAAACCAGAAAACGTGCTGGTTCGCGACGATGGCCACATTATGCTGTCAGACTTTGATCTTTCTCTTAGATGTGCTGTGTCCCCTACACTTATCAGAACATCCCATGATAGCGAGCCTTCAAAACGTGCCGGTGGTGGTGCGTTCTGTGTCCAGCCTGCTTGTATTGAGCCTACTTCAGTATGCATCCAACCGTCCTGTTTCATGCCTCGGCTCTTCCCACAGAAAAACAAGAAATCAAGGAAGGCTAGAGCTGATCWGGGGCTTCCTGCCAACACGCTTCCGGAGCTYGTTGCCGAGCCTACTCAAGCTCGGTCTATGTCCTTCGTCGGCACTCACGAATACCTCGCCCCTGAAATCATCAAAGGAGAGGGCCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCATGAGTTGTTATATGGGAAGACACCTTTTAAAGGCTCAGGAAACCGTGCTACATTGTTCAATGTGGTTGGTCAGCAGCTCAAGTTCCCCGAATCGCCGGCCACTAGCTATGCAAGCCGGGATCTTATCCGTGGCTTGCTGGTCAAGGAACCACAGCACCGGCTTGGGGTGAAGAGGGGTGCCACTGAGATCAAGCAGCACCCTTTCTTTGAAGGCGTGAATTGGGCTTTGATTAGGTGTAGCACGCCGCCGGAAGTGCCAAGACCGGTCGAAGCCGAGCTACCGGCAACAAAGTTTGAAGCCGTTAATACAGTTGGGGTTGGCAACAATAGTAAGAGGATGGTAGGTAATAATAGTAATGATAATAATGATAACAATAATAATAATAAAAATGAGATGAAGTCTGGGGGTAAATATCTGGATTTTGAGTTCTTTTAG | 2268 | 0.4656 | MERVAEPKVLPRTMPVLVEVSNGHKGTISEAIQRLNGSEFSSREVNVMNQFSKARESPVTRLASIKEVAQLSNARVVLVREDMGFQEPISPAPTRTLKGKVSLPESEEGLKASSLESAPSSFAGASHPPEPVDTDLMRTVYVPIGHSKAEDASLTKNMSLQGPFLEDLTIRVATKKPTLTVLSPAESMVEESNGTENLSSPQNTEHSIPPPDSEEKECVWDSSLPPTPSGNVSPHSSIDSSSVVRAMSIANSCASTYRSDAFTSDGMISLDRNCDSTKGSVSVRGESLESAKTSPSRVSDSSGLSDDSSWSNITGGANKPHKGNDPRWNAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLESRKKLNRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTSHDSEPSKRAGGGAFCVQPACIEPTSVCIQPSCFMPRLFPQKNKKSRKARADXGLPANTLPELVAEPTQARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVEAELPATKFEAVNTVGVGNNSKRMVGNNSNDNNDNNNNNKNEMKSGGKYLDFEFF* | 756 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo04g2617 | 755 | Gene3D | Transferase(Phosphotransferase) domain 1 | 574 | 699 | - | - | |
Amo04g2617 | 755 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 80 | 755 | - | - | |
Amo04g2617 | 755 | SMART | serkin_6 | 346 | 680 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo04g2617 | 755 | Pfam | Protein kinase domain | 347 | 496 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo04g2617 | 755 | Pfam | Protein kinase domain | 577 | 680 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo04g2617 | 755 | CDD | STKc_phototropin_like | 344 | 703 | - | - | |
Amo04g2617 | 755 | MobiDBLite | consensus disorder prediction | 224 | 238 | - | - | |
Amo04g2617 | 755 | MobiDBLite | consensus disorder prediction | 89 | 134 | - | - | |
Amo04g2617 | 755 | Gene3D | Transferase(Phosphotransferase) domain 1 | 426 | 494 | - | - | |
Amo04g2617 | 755 | Gene3D | Phosphorylase Kinase; domain 1 | 700 | 710 | - | - | |
Amo04g2617 | 755 | MobiDBLite | consensus disorder prediction | 185 | 208 | - | - | |
Amo04g2617 | 755 | SUPERFAMILY | Protein kinase-like (PK-like) | 329 | 705 | IPR011009 | - | |
Amo04g2617 | 755 | MobiDBLite | consensus disorder prediction | 273 | 322 | - | - | |
Amo04g2617 | 755 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 467 | 479 | IPR008271 | GO:0004672|GO:0006468 | |
Amo04g2617 | 755 | MobiDBLite | consensus disorder prediction | 718 | 744 | - | - | |
Amo04g2617 | 755 | MobiDBLite | consensus disorder prediction | 273 | 318 | - | - | |
Amo04g2617 | 755 | PANTHER | FLIPPASE KINASE 1-RELATED | 80 | 755 | - | - | |
Amo04g2617 | 755 | MobiDBLite | consensus disorder prediction | 183 | 238 | - | - | |
Amo04g2617 | 755 | ProSiteProfiles | Protein kinase domain profile. | 346 | 680 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo04g2617 | 755 | MobiDBLite | consensus disorder prediction | 718 | 745 | - | - | |
Amo04g2617 | 755 | Gene3D | Phosphorylase Kinase; domain 1 | 344 | 425 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo04g2617 | Amo-Chr4 | 99302227 | 99306027 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo04g2617 | 1 | 755 | AGC Kinase Gene Family | AT2G44830 | 64.000 | 0.0 | 917 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_RSK-2 | Amo04g2617 | Pkinase | 4.3e-37 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo04g2617 | - | - | gmx:100800019 | 1182.55 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Amo14g3594 | 14 | 140117037 | 140120990 | Amo04g2617 | 04 | 99302227 | 99306027 | hybridization |