Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2612 ATGGAATTCAGATTCAAACCACCAAGTCCTATTCGCTGTGCACGATACCGTCAATTATTTCCCCAAGGTACCAACCACTGTCTACTAGTAGGATGTGATTGTCCTTCTCCTTCAATTTTTATTTCATTTCCTCCTCGGCGGCGTCGGCGGTCTTTGTTGTCACCACCACCGTTACCTCCTCCTCCACCATTGTTGCCGCTACCACCACCACTAGCTCTTTCCTCACCAACACCATCATTGCCACCGCCACCACCACTAGCTCTTTGCCCACCACCGCTACGACTTTTCTCTCCTGCCCCTCCGCTTCCTCAAACTCCCCTGCCGGCGAAACCTTCCTCTAAACCAACCCAGGCACTGTGTTTCCCTCCCCCAAGTTCGACTCCAGCACCATCTTTTTCGTCAAGTAGCCTCATCGTTGGAATGGCGGCAGCAGTCACTTTTGCCATTTTGATTGTGGTGCTCACCGCTTTTGGCATTTTTTATTGGAGGAATAGGAAGAGAGAACATGATAAGGGGCTCAGATTTAAAGGCAATAACGGAATAATAGAAATGTCATCAAAGAACAGAATATTCAGATACGAGGAGTTGGCAGTTGCAACAGATGGATTCTCCAAAGCAAATTTGGTTGGAGAAGGTGGATTCGGTTATGTCCACAAAGGAGTTCTTCCAAACGGCATGAAGGCTGCCATCAAACAGCTCAAGGATGGAAGTAGGCAGGGAGAGCGTGAATTCCAAGCTGAAGTAGACATAATCACTCGGCTTCATCACAGGAATCTCGTTTCTTTACTTGGATATTGCATCGCTGGCCACCATAGACTTCTCGTCTACGAATTTGTTCCAAACAATACATTAGAGTTCCATCTACATGTGATTTTCGTCGCAGCTGAAGGAAGCCGTTACCGAGCTGCTCCCCTCTCTATGGTGCTCTCACAGTGGTTTCGGTCGTGGCTGAAGGAGGCCGTCGCTAAGCTGTTCTCCTCTCTACGTTGTTGCTGCAACCACCTTCTTGATGATTTAATTTGCCATGACTCTATCTTTGTTGTCCCTTCTTGTAGCGTCGAGGTTGACCTTCAAAGCTACTGGAAGCCGTTGCCATCGTCGCTAGAACTTGTTTATCAACATATAATGATTTTTGTATTTTCAGGTTATCCCAAGATCATCCATCGTGATATCAAAGCTGCTAACATTCTCCTCGATTTTAATTTCCAAGCAAAGGTTGCTGATTTTGGGCTTGCAAAGTTTTGCCCGGATATGAATACGCATGTTTCCACTCGAGTCATGGGAACTCTAGGGTATGTAGCTCCTGAATATGCTTCCAGTGGAAACCTCACTGAAAAAGCCGACGTTTTCTCCTTTGGAGTCATGCTTCTCGAGTTAATTACTGGTCGCCGACCAGTAATTGATTCACGTCATACTTTCATGGAGGCAATGCCTTTGCTAATAAAGGTTTTGAAAGAGAATAATTTTGAAGTTGTAGCTGACCAAAAGCTCCAAAATCAGTATGAAGCAACCGAAATGGTTTCCATGCTGGCCTCTGCAGCTGCTTCTATACGATATGAAGCAAAGCTTCGACCAAAGATGAGCCAGATAGTTCGTGCTTTGGAAGGAGATGCATCTCAAGTAGCTGAGTTCACTTCTAATGTATTACGCTTAGATTCTGAGGCTGCTACATACAGACGAGAAATGATCAAAATCATTAGTGACATGAGTGGATCCACGAGTTAA 1725 0.4551 MEFRFKPPSPIRCARYRQLFPQGTNHCLLVGCDCPSPSIFISFPPRRRRRSLLSPPPLPPPPPLLPLPPPLALSSPTPSLPPPPPLALCPPPLRLFSPAPPLPQTPLPAKPSSKPTQALCFPPPSSTPAPSFSSSSLIVGMAAAVTFAILIVVLTAFGIFYWRNRKREHDKGLRFKGNNGIIEMSSKNRIFRYEELAVATDGFSKANLVGEGGFGYVHKGVLPNGMKAAIKQLKDGSRQGEREFQAEVDIITRLHHRNLVSLLGYCIAGHHRLLVYEFVPNNTLEFHLHVIFVAAEGSRYRAAPLSMVLSQWFRSWLKEAVAKLFSSLRCCCNHLLDDLICHDSIFVVPSCSVEVDLQSYWKPLPSSLELVYQHIMIFVFSGYPKIIHRDIKAANILLDFNFQAKVADFGLAKFCPDMNTHVSTRVMGTLGYVAPEYASSGNLTEKADVFSFGVMLLELITGRRPVIDSRHTFMEAMPLLIKVLKENNFEVVADQKLQNQYEATEMVSMLASAAASIRYEAKLRPKMSQIVRALEGDASQVAEFTSNVLRLDSEAATYRREMIKIISDMSGSTS* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2612 574 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 384 544 - -
Amo04g2612 574 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 184 289 - -
Amo04g2612 574 Gene3D Transferase(Phosphotransferase) domain 1 368 548 - -
Amo04g2612 574 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 384 544 - -
Amo04g2612 574 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 184 289 - -
Amo04g2612 574 ProSitePatterns Protein kinases ATP-binding region signature. 209 231 IPR017441 GO:0005524
Amo04g2612 574 Gene3D Phosphorylase Kinase; domain 1 166 278 - -
Amo04g2612 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 386 398 IPR008271 GO:0004672|GO:0006468
Amo04g2612 574 MobiDBLite consensus disorder prediction 100 124 - -
Amo04g2612 574 ProSiteProfiles Protein kinase domain profile. 203 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2612 574 SMART serkin_6 203 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2612 574 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Amo04g2612 574 SUPERFAMILY Protein kinase-like (PK-like) 186 535 IPR011009 -
Amo04g2612 574 Pfam Protein tyrosine and serine/threonine kinase 207 534 IPR001245 GO:0004672|GO:0006468
Amo04g2612 574 MobiDBLite consensus disorder prediction 51 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2612 Amo-Chr4 99219251 99225374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2612 110 550 Trihelix Transcription Factor Family AT5G38560 38.037 9.76e-87 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo04g2612 PK_Tyr_Ser-Thr 1.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2612 - - adu:107486130 369.777