LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo04g2603	ATGAAACCTTCCTCTAAACCAACTCAGGTACTGCATTTCCCTCCTCCAAGTTCGACTCCAGCACCATCTTTTTCGTCAAGTGGCGTCATCGTTGGAATGGCGGCAATCGTCACTTTCGCCATTTTGATTGTGGTGCTTAGCGCTTTTGGTATTTCTTATTGGAAGAATAGGAAGAGAAAACATGATAAAGATCTTGGATTTAAAGGGAATAACGGGATAATAGAAATGTCATCAAAGAACAGAATATTCAGATACGAGGAGTTGGAAGTTGCAACAGATGGGTTCTCGAAAGCAAATTTGGTTGGAGAAGGTGGATTCGGTTATGTCCACAAAGGAGTTCTTTCAAACGGCAAGGAGGCTGCCATCAAACAGCTCAAGGATGGAAGTAGGCAGGGAGAGCGTGAATTCCAAGCTGAAGTAGACATAATCACTCGGCTTCATCACAGGAATCTCGTTTCTTTACTTGGATATTGCATCGCTGGCCACCGTAGACTTCTCGTCTACGAATTTGTTCCAAACAATACATTAGAGTTCCATCTACATGGTTATCCCAAGATCATCCATCGTGATATCAAAGCCGCTAACATTCTCCTCGATTTTAATTTCCAAGCGAAGGTTGCTGATTTTGGACTTGCAAAGTTATGCCAGGATATGAATACGCATGTTTCCACTCGAGTGATGGGAACTCTAGGGTATGTAGCTCCTGAATATGCTTCCAGTGGAAATCTCACTGAAAAAGCCGACGTTTTCTCCTTCGGAGTCATGCTTCTTGAGTTAATTACTGGCCGCCGACCAATAATTGATTCACATCATACTTTCGTAGAGTTTGGTGAATTCTCGCAGGCAATGCCTTTGCTAACAAAGGTTTTGAAAGAGAATAATTTTAAAGTTGTAGCTGACCGAAAGCTCCAAAATCAGTATGAAGCAACCGAAATGGTTTCCATGCTGGCCTCTGCAGCTGCTTCTATACGATATGAAGCAAAGCTTCGACCAAAGATGAGCCAGATAGTTCGTGCTTTGGAAGGAGATGCATCTCAAGTAGCTGAGTTCACTTCTAATGTATTATGCTTAGATTCTGAGGCTGTTACGCACAGACAAGAAATGATTAAAATCATTAGTGACATGAGTGGATCCACGAGTTAA	1143	0.4226	MKPSSKPTQVLHFPPPSSTPAPSFSSSGVIVGMAAIVTFAILIVVLSAFGISYWKNRKRKHDKDLGFKGNNGIIEMSSKNRIFRYEELEVATDGFSKANLVGEGGFGYVHKGVLSNGKEAAIKQLKDGSRQGEREFQAEVDIITRLHHRNLVSLLGYCIAGHRRLLVYEFVPNNTLEFHLHGYPKIIHRDIKAANILLDFNFQAKVADFGLAKLCQDMNTHVSTRVMGTLGYVAPEYASSGNLTEKADVFSFGVMLLELITGRRPIIDSHHTFVEFGEFSQAMPLLTKVLKENNFKVVADRKLQNQYEATEMVSMLASAAASIRYEAKLRPKMSQIVRALEGDASQVAEFTSNVLCLDSEAVTHRQEMIKIISDMSGSTS*	381

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Amo04g2603	380	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	184	345	-	-
Amo04g2603	380	SMART	serkin_6	95	340	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Amo04g2603	380	MobiDBLite	consensus disorder prediction	1	22	-	-
Amo04g2603	380	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	184	345	-	-
Amo04g2603	380	Gene3D	Transferase(Phosphotransferase) domain 1	177	354	-	-
Amo04g2603	380	Gene3D	Phosphorylase Kinase; domain 1	57	170	-	-
Amo04g2603	380	SUPERFAMILY	Protein kinase-like (PK-like)	72	340	IPR011009	-
Amo04g2603	380	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	75	182	-	-
Amo04g2603	380	ProSiteProfiles	Protein kinase domain profile.	95	351	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Amo04g2603	380	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	75	182	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo04g2603	Amo-Chr4	99148857	99153006	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo04g2603	16	371	Trihelix Transcription Factor Family	AT5G38560	42.657	9.17e-105	321

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-1	Amo04g2603		Pkinase	1.3e-25	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo04g2603	-		-	aip:107637227	666.381

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