Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2591 ATGTCACCAATTATGTCGGAAAAAATGGTTGTCTTAATATTGCTTTGTGTGTTTATAGTAAAAGTGTCTTCATCAAGTGAAGCAAATGCACTCTTAAAATGGAAGGCCAGCCTTGAGAACCAAAGCCAAGTTATGTTATCATCTTGGAAGAACGGGACAAGTCCATGCAAATGGAAAGGAATTCAATGTGACAAATCAAAATCCATCACAACCATCAATCTTGAAAACTTTGGACTCAAAGGTACACTTCACAGTCTTAGCTTCTCTTCATTTCCCAACCTCATTTCCATAAACATATACAACAACTTGTTCCATGGAACCATTCCCTCACACATTGGTAACATGTCAAAAGTCAACACTTTGAACTTTTCTTTAAATCATTTTGAGGGTTCCATCCCTAAAGAATTGTGGACACTGAGGAGTTTACAAAAGCTTGATCTTTCATTGTGTTATCATCTAAGTGGACCTATCCCTTCTTCCATTGAAAACTTGGCCAACTTGACATATCTAGACTTAGGAGAAAACAATCTTTCTAGCCACATTCCTCCTGAGATTGGGAAACTAAGAAACCTTTTGTTTCTTGGTATTGCTGAGAGTAATCTTGTTGGTTCCATTCCCCATGAAATTGGCATGTTAACAAATCTTGAGTATCTTGATTTGTCAGGAAATGTTCTCTCTGGTAATATCCCTTCTACAATTAGTAACATGACCAATTTGCATGAAGTTTCAATTTCTAATAACACCCTCAATGGTACAATCCCTTCCTCCATTGGGAGCATGTCTAACTTGACATTGCTATGGCTTGATGGCAATCAACTTTCTGGATCCATCCCTGCATCTATAGGAAACTTGTCTAATCTCTATTCGCTTCAACTTGATTCGAATAGCCTCACCGGATCCATTCCTTCCACAATTGGAAACATGACAAGTCTTGTTGAGATTTTTCTCCGCTTTAACAATCTTTCAGGACACATTCCTGCCTCTGTTGGCAATTTGATCAACTTGGAATCCTTATATCTCCAAGGAAACAATCTCTCTGGATCTATTCCTGACTCAATTGGAAAGTTGAAAAGGCTCTCCTTTCTTGAACTGTCCTTTAACAAACTCACTGGCACCATTCCACACTCAATTAATAACATTACCAACATGATTGACTTTCTAGTAGCCTCAAACAATCTCACTGGTCAATTGCCACCTAACATTTGCTTAGGTGGTTCATTGAATTTCTTCAATGTTGATCACAACCATTTCACTGGTCCAGTACCAAGTACCTTAAAGAACTGCTCTAGTCTTGTTAGAATAAGGTTAGAGCAGAACCATTTGAAGGGAGACATATCACAAGATTTTGGCATTTATCCTAATTTGGTGCATATTGACCTGAGTGACAACAAATTTTATGGTCAAATTTCACCAAACTGGGGGAAGAGCCATAATCTTCAGAACTTGTTGATGTCCAATAATAATATTTCTGGTGCTATACCAATACAAATTGTTGAGGCTACCAATCTAGGAAGGCTTCATCTTTCTTCTAATCATTTGAGTGGAAAGATTCCAAATGAAATAAGAAATATGAGAAGACTGTTTGAACTCAAGATCAGCAACAATCATCTTTCAGGAAACATTCCATCAGATATAGGATCATTGCATGGTCTTCAAATCTTGCACCTAGCAGGAAATGAATTGAGTGGCAACATACCAAGACAAGTTGTGCAGTTACCCAACTTGTTGGAATTGAATTTGAGCAACAACAAACTAGAGGGAAGTATCCCTTCTGATTTTCAATCATTGCAAACTCTTTACTCTCTTGATCTTAGCGGCAATTTGTTGAATGGACCAATACCAAAAGTGCTTGGAGAGTTGAAGGAATTGCGATTATTGAACCTTTCACACAACAATCTTTCTGGGACAGTTCCATCAAGTTTTGATGGCATGTCAAGCTTGATTTCTGTCAACATATCATACAATCAACTAGAAGGCCCTCTTCCAAACAATAAAGCCTTTCTTAGTTCTTCAATTGAATCATTGAAAAATAACAAAGGCTTGTGTGGTAATGTATCTGGCTTGGTGCCATGTCCAAGCAATCTTATCAGCAAAAATCATAAGGTCATGTTATTGGTATTGCTTCTTGTCTTTGGAGTACTAGTACTTGTGCTTTCTGTGGTGGCTGTTTCTGTATATATTCTTTGTAGAAAAGCAAGAAAGAAAACAGGCACAAATCAAGAAACACAGCCAAAAGAACTTTTTTCAATATGGAGCCATGATGGGAAAATGGCATTTGAAACTATCATTGAAGCCACCAACAATTTTGATGACAAATATATCATTGGAATTGGAGGGCAAGGATCTGTTTACAGGGCTGAGTTGCCTTCAGGTATGGTTGTTGCTGTGAAGAAGCTTCATACAGAAACATCCAACTTGAAATCATTTGAAAATGAGATCCAAGCATTGACAGAAATCAGGCACCGAAACATCATAAAGCTGTATGGTTTTTGCCAGCACTCGCGGTTCTCATTTCTGGTTTATAAGTTCTTGGAAGGTGGAAGCTTGGATCAAGTACTAAGAGATGAAACACATGCAACTCTGTTTGATTGGAAAAAGAGGGTGAATGTGGTTAAAGGAGTCGCAAATGCTTTGTCATACATGCATCATGATTGCATACCCCCTCTTGTTCATCGCGACATATCAAGCAAGAATGTTCTTCTAGATTCAGACTATGAAGCTCATGTATCTGATTTTGGAACAGCCAAGTTCTTGAAACCTGGGTCAAGTTGGACAACACTTGCAGTCACCTTTGGCTATGCAGCTCCAGAGCTAGCTCAGACAATGGAAGTGACAGAGAAATGTGATGTATATAGTTTTGGAGTGCTTTGTTTGGAGATTCTTATGGGAAAGCATCCTGGGGATCTGATAAGTTCATTGTTGTCACCATCAACAGCATTAATCAGTTGCAATTTGTTATTGGTTGAAGTCATAGATCAGAGACCTCCACATCCTGAAGAATTAATGGTTGGTGATATCATGAAGATCATAAAGTTGGCACTGAATTGCTTGAGCCACAGTCCACAATCTCGACCAAGCATGCATCAAGTGTCCAAAGAGCTTATGATAGGAAAATTGCCTTTTGCTAATCACCAGTTTCCTATCATCAGAATTGGACAGCTCAATGAAGAATGA 3174 0.3834 MSPIMSEKMVVLILLCVFIVKVSSSSEANALLKWKASLENQSQVMLSSWKNGTSPCKWKGIQCDKSKSITTINLENFGLKGTLHSLSFSSFPNLISINIYNNLFHGTIPSHIGNMSKVNTLNFSLNHFEGSIPKELWTLRSLQKLDLSLCYHLSGPIPSSIENLANLTYLDLGENNLSSHIPPEIGKLRNLLFLGIAESNLVGSIPHEIGMLTNLEYLDLSGNVLSGNIPSTISNMTNLHEVSISNNTLNGTIPSSIGSMSNLTLLWLDGNQLSGSIPASIGNLSNLYSLQLDSNSLTGSIPSTIGNMTSLVEIFLRFNNLSGHIPASVGNLINLESLYLQGNNLSGSIPDSIGKLKRLSFLELSFNKLTGTIPHSINNITNMIDFLVASNNLTGQLPPNICLGGSLNFFNVDHNHFTGPVPSTLKNCSSLVRIRLEQNHLKGDISQDFGIYPNLVHIDLSDNKFYGQISPNWGKSHNLQNLLMSNNNISGAIPIQIVEATNLGRLHLSSNHLSGKIPNEIRNMRRLFELKISNNHLSGNIPSDIGSLHGLQILHLAGNELSGNIPRQVVQLPNLLELNLSNNKLEGSIPSDFQSLQTLYSLDLSGNLLNGPIPKVLGELKELRLLNLSHNNLSGTVPSSFDGMSSLISVNISYNQLEGPLPNNKAFLSSSIESLKNNKGLCGNVSGLVPCPSNLISKNHKVMLLVLLLVFGVLVLVLSVVAVSVYILCRKARKKTGTNQETQPKELFSIWSHDGKMAFETIIEATNNFDDKYIIGIGGQGSVYRAELPSGMVVAVKKLHTETSNLKSFENEIQALTEIRHRNIIKLYGFCQHSRFSFLVYKFLEGGSLDQVLRDETHATLFDWKKRVNVVKGVANALSYMHHDCIPPLVHRDISSKNVLLDSDYEAHVSDFGTAKFLKPGSSWTTLAVTFGYAAPELAQTMEVTEKCDVYSFGVLCLEILMGKHPGDLISSLLSPSTALISCNLLLVEVIDQRPPHPEELMVGDIMKIIKLALNCLSHSPQSRPSMHQVSKELMIGKLPFANHQFPIIRIGQLNEE* 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2591 1057 PANTHER LRR RECEPTOR-LIKE KINASE 244 1054 - -
Amo04g2591 1057 PANTHER LRR RECEPTOR-LIKE KINASE 152 256 - -
Amo04g2591 1057 PANTHER LRR RECEPTOR-LIKE KINASE 14 158 - -
Amo04g2591 1057 Pfam Leucine Rich Repeat 214 235 IPR001611 GO:0005515
Amo04g2591 1057 Pfam Leucine Rich Repeat 574 596 IPR001611 GO:0005515
Amo04g2591 1057 Coils Coil 799 819 - -
Amo04g2591 1057 Gene3D Ribonuclease Inhibitor 179 276 IPR032675 -
Amo04g2591 1057 ProSiteProfiles Leucine-rich repeat profile. 334 356 IPR001611 GO:0005515
Amo04g2591 1057 SMART LRR_sd22_2 164 193 - -
Amo04g2591 1057 SMART LRR_sd22_2 260 286 - -
Amo04g2591 1057 SMART LRR_sd22_2 356 382 - -
Amo04g2591 1057 SMART LRR_sd22_2 212 238 - -
Amo04g2591 1057 SMART LRR_sd22_2 308 337 - -
Amo04g2591 1057 SMART LRR_sd22_2 620 646 - -
Amo04g2591 1057 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 152 256 - -
Amo04g2591 1057 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 244 1054 - -
Amo04g2591 1057 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 14 158 - -
Amo04g2591 1057 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Amo04g2591 1057 ProSiteProfiles Protein kinase domain profile. 769 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2591 1057 SUPERFAMILY RNI-like 349 664 - -
Amo04g2591 1057 Pfam Leucine rich repeat 285 345 IPR001611 GO:0005515
Amo04g2591 1057 Pfam Leucine rich repeat 598 657 IPR001611 GO:0005515
Amo04g2591 1057 Gene3D Transferase(Phosphotransferase) domain 1 844 1039 - -
Amo04g2591 1057 Gene3D Phosphorylase Kinase; domain 1 729 843 - -
Amo04g2591 1057 PRINTS Leucine-rich repeat signature 359 372 - -
Amo04g2591 1057 PRINTS Leucine-rich repeat signature 572 585 - -
Amo04g2591 1057 Pfam Protein kinase domain 771 1032 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2591 1057 ProSiteProfiles Leucine-rich repeat profile. 574 597 IPR001611 GO:0005515
Amo04g2591 1057 Gene3D Ribonuclease Inhibitor 389 699 IPR032675 -
Amo04g2591 1057 SUPERFAMILY Protein kinase-like (PK-like) 752 1034 IPR011009 -
Amo04g2591 1057 Gene3D Ribonuclease Inhibitor 277 383 IPR032675 -
Amo04g2591 1057 Gene3D Ribonuclease Inhibitor 25 178 IPR032675 -
Amo04g2591 1057 SUPERFAMILY RNI-like 72 418 - -
Amo04g2591 1057 SMART LRR_typ_2 620 643 IPR003591 -
Amo04g2591 1057 SMART LRR_typ_2 164 188 IPR003591 -
Amo04g2591 1057 SMART LRR_typ_2 284 308 IPR003591 -
Amo04g2591 1057 SMART LRR_typ_2 260 283 IPR003591 -
Amo04g2591 1057 SMART LRR_typ_2 524 548 IPR003591 -
Amo04g2591 1057 SMART LRR_typ_2 212 236 IPR003591 -
Amo04g2591 1057 SMART LRR_typ_2 572 595 IPR003591 -
Amo04g2591 1057 SMART LRR_typ_2 332 356 IPR003591 -
Amo04g2591 1057 ProSitePatterns Tyrosine protein kinases specific active-site signature. 889 901 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2591 Amo-Chr4 98970850 98974105 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2591 9 936 Receptor kinase-like Gene Family AT4G08850 45.032 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo04g2591 Pkinase 5.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2591 - - aip:107635237 1382.47