LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo04g2589	ATGAGTGCTAACTGTGTGCCCCCTAATCCTGCCAACTACTACTCCTTCAAAACTATGGGGAGTTCCAATATTTACTATCTTCACCTTATTCTTTCATCGTTTCTTCTTTTCACATTCTTCCCGGAAACTGTCCATGGCAGCAAAAGGTGTTACATTGTATACATGGGAGCACATTCTCATGGACAAAGCCCTACCACTTTAGACATGGAAGCCGCTACAATTTCTCACTATGGTTTACTAGCTTCAGTTTTGGGAAGCCATGAGAAAGCGAAAGAAGGCATGATTTACTCATACAATAAGCACATCAATGGCTTTGCAGCTTTACTTGACGAAGAAGAAGCAGCAATTATTGCAAAAAAAGCGAATGTGGTGTCAGTGTTCTTGAGCAAAGAGCGCAAACCTCAAACAACAAGGTCATGGGAAGTTCTTGGACTTCGCAGAAATGCTAAGAACACTGCATGGCAAAAGGGTAGATTTGGTGAAAATACAATCATCGCAAACATTGACACAGGGGTTTGGCCTGAATCCAAAAGCTTTAGTGACAACGGATATGGCCCCGTCCCATCAAAATGGCAAGGGGGCAACGTTTGTCAATTAGACAAGCGCCCTCGTTCCACAAAGAATCCTTGTAACAGGAAGCTAATTGGAGCAAGATACTTCAGCAAAGCTTTTGAGGCAACGAATGGAAACATCATCAGCCCAGCGATGCATACAGCACGTGACTTCGAGGGGCATGGGACTCACACTCTATCCATAGCTGGTGGCAATTTTGTACCGGGAGCGCATGTATTTGCAGTTGGGAACGGCACCGCAAAAGGTGGGTCCCCAAGTGCCAGAGTGGCAGCTTACAAAGTTTGCTGGTCTCCCACGGAGGAAAAGAGTTGCCACGAGGGTGATATATTGGCTGCAATAGACCAAGCCATAAGCGATGGTGTTGATGTCATTAACCTCTCTGTTGGTGGTCGCCAAGTTGTAACTGCACAAGATATCTTCACCGATGCGGTTTCCTTAGGGGCCTTCCATGCAATTTCTAGAAACATCTTATTAGTTGCCTCAGCTGGGAACGATGGACCTGCACCTCAAACTGTTGTCAATGGTGCTCCTTGGATCTTCACCATTGGTGCTAGCACAATAGATAGGGAGTTTCGCAGTACCATTACCTTCAGTGACGGTCGACAAATCACGGGAGGTAGTCTTTCAGTAACATTGCCACCTAACCAGGCCTTTGATTTTATCCTGGCTACTGACGGTAAACTTGCCAATGCCACAATTCAAGATGCTCAATTTTGCAGGCCAGGTACACTTAACCGTACAAAAGTTGCAGGTAAAATTGTGAACTGCTTGAGAGAAGGGAATATAAAATCAGTTGCTGAGAGTCTGGAAGCAAATGCTGCGGGTGCAATGGGAATGCTGCTCGAAAATCAACAAAAACAAGGCAAAACAGTTAGCGATGAACCTCAGATGGTGCCCAGTGTCAATTATCGCAGTCGAGGGAGGGGTCCAACGCCTGGATACTTTCCTAACTCCCTAACATCCCACAATTCCAATCCTTCTTATTATGACGTCATAACTGCCACAACTCCTCCTTCTCCGACGCCGTCTCTTACAGTAAAACTCTCCAAAGCAACAACGGTGGTAGGAACAAAGCCAGCTCCAGTTATGGCTTCTTATTCATCTAGAGGACCCAATAAGATTCAGCCATCCATACTCAAGCCTGATGTGATTGCACCTGGAGTAAATATACTTGCTTCATATTCACTAGGCGTAAGTCCCTCTAATCTTGAAACTGATCGTCGTCGCTTCGAATTCAATGTGCTTCAAGGAACTTCTATGTCCGCCTCTCATGTTTCTGGTATTGCCGGACTTCTCAAAACACGTTATCCTGATTGGAGTCCTGCAGCTATTAAATCTGCAATCATGACCACTGCAACCACACGGGACAACACAAATAGGCCGATTCAGGATGCATTTGATCGTGATTTAGCAAACTCATTTGATTATGGGTCAGGACATGTTCAACCTAACCTTGCAATGGAGCCAGGACTTGTTTATGATCTTCACCTTATTGATTATTTGAACTTCTTATGTGCATCTGGATACGACCAACAAGCAATTTCAGCACTTAATTTCAACAAAACTTTTGTTTGTAAAGGAAGTCATAGCATTGATAACTTGAACTACCCTTCAATTACACTACCAAATCTTGGGTTGAGTCCGGTAACGGTTATTCGTACATTAACCAATGTAGGCCCTTCAGGCACATATAATGCAAGTGCCAAAGTGGATGGATGCAAAATTACTATCGTGCCCAATTCCTTGACTTTCAAGAGAATGTATGAGAAGAAAACATTTAAGGCCATAGTGCAGGCATCAAGTGTGATTCAAGTTGATAAATATCAATTTGGTGAAATGATATGGACAGATAGAAAGCATAGAGTCAGGAGTCCTATCACAATCAGACGCCGCAAGTGA	2472	0.4401	MSANCVPPNPANYYSFKTMGSSNIYYLHLILSSFLLFTFFPETVHGSKRCYIVYMGAHSHGQSPTTLDMEAATISHYGLLASVLGSHEKAKEGMIYSYNKHINGFAALLDEEEAAIIAKKANVVSVFLSKERKPQTTRSWEVLGLRRNAKNTAWQKGRFGENTIIANIDTGVWPESKSFSDNGYGPVPSKWQGGNVCQLDKRPRSTKNPCNRKLIGARYFSKAFEATNGNIISPAMHTARDFEGHGTHTLSIAGGNFVPGAHVFAVGNGTAKGGSPSARVAAYKVCWSPTEEKSCHEGDILAAIDQAISDGVDVINLSVGGRQVVTAQDIFTDAVSLGAFHAISRNILLVASAGNDGPAPQTVVNGAPWIFTIGASTIDREFRSTITFSDGRQITGGSLSVTLPPNQAFDFILATDGKLANATIQDAQFCRPGTLNRTKVAGKIVNCLREGNIKSVAESLEANAAGAMGMLLENQQKQGKTVSDEPQMVPSVNYRSRGRGPTPGYFPNSLTSHNSNPSYYDVITATTPPSPTPSLTVKLSKATTVVGTKPAPVMASYSSRGPNKIQPSILKPDVIAPGVNILASYSLGVSPSNLETDRRRFEFNVLQGTSMSASHVSGIAGLLKTRYPDWSPAAIKSAIMTTATTRDNTNRPIQDAFDRDLANSFDYGSGHVQPNLAMEPGLVYDLHLIDYLNFLCASGYDQQAISALNFNKTFVCKGSHSIDNLNYPSITLPNLGLSPVTVIRTLTNVGPSGTYNASAKVDGCKITIVPNSLTFKRMYEKKTFKAIVQASSVIQVDKYQFGEMIWTDRKHRVRSPITIRRRK*	824

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo04g2589	823	Pfam	Fibronectin type-III domain	724	819	IPR041469	-
	Amo04g2589	823	CDD	Peptidases_S8_3	133	644	IPR034197	-
	Amo04g2589	823	Pfam	Peptidase inhibitor I9	51	133	IPR010259	-
	Amo04g2589	823	SUPERFAMILY	Subtilisin-like	135	682	IPR036852	GO:0004252\|GO:0006508
	Amo04g2589	823	Gene3D	-	695	822	-	-
	Amo04g2589	823	ProSiteProfiles	Serine proteases, subtilase domain profile.	139	678	-	-
	Amo04g2589	823	PANTHER	TRIPEPTIDYL-PEPTIDASE II-RELATED	38	820	-	-
	Amo04g2589	823	Gene3D	-	379	546	-	-
	Amo04g2589	823	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	38	820	IPR045051	-
	Amo04g2589	823	CDD	PA_subtilisin_like	385	492	-	-
	Amo04g2589	823	Pfam	Subtilase family	160	648	IPR000209	GO:0006508\|GO:0008236
	Amo04g2589	823	Gene3D	Peptidase S8/S53 domain	163	691	IPR036852	GO:0004252\|GO:0006508
	Amo04g2589	823	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	41	134	IPR037045	-
	Amo04g2589	823	PRINTS	Subtilisin serine protease family (S8) signature	160	179	IPR015500	-
	Amo04g2589	823	PRINTS	Subtilisin serine protease family (S8) signature	241	254	IPR015500	-
	Amo04g2589	823	PRINTS	Subtilisin serine protease family (S8) signature	607	623	IPR015500	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo04g2589	Amo-Chr4	98933014	98939689	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo04g2589	51	820	Subtilisin-like Serine Gene Family	AT2G04160	48.715	0.0	704

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo04g2589	-		-	adu:107486040	1587.01