Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2582 ATGAACTTCATAGCATGCAGCTGCAGGGGGATCATCATCCTCTTCATATTCCTGTGTGTCCTAGTAAAACTCTCTTCAACTTACACCATGGAAGCAAATGCACTCTTGAAGTGGAAAGCCAGCCTTGACAACCAAAGCAAACTCACCTTGTCATCTTGGAAGAACGGGACCAGTCCATGCAGATGGAAGGGGATTCATTGTGATAAATCCAGGTCCATCACAACCATGAGTCTTGAAAATTTTGGACTCCAAGGTACACTCCACACTCTCAACTTCTCCTCATTCCCCAACCTCCTCACCATAAATATCTACAACAATTTCTTTTATGGAACCATCCCCCCTCAAATTGGTAATATGTCCAGAGTCAATAGATTGAACTTTTCTTTAAATTCTTTTGAGGGTTCCATCCCTAAAGAGATGTGGACTTTGAGGAGTTTACAAATGCTTGATCTTTCACAATGTTCCAGTCTAAGTGGACCAATCCCAGGTTCCATTGCAAATTTGACCAACTTAACATATCTAGACTTAGGAACCAACAATTTTTCTGGTAGCATTCCTCATGAGATTGGAAAATTGGTCAACCTTAATTCTCTTGCTGTCAACGGAAACCACTTGTCTGGTTTCATTCCGCAAGAAATTGGACGACTGACGAACCTTAGGCTGCTTTATTTGTCAGAGAACACTCTCAATGGTACTATCCCTTCTGTAATAACTAACCTGAGCTGCTTGAGTGCACTTCTTCTTCATAATAACACCCTTTCTGGCCTAATCCCACCCTCCCTGTGGAATATGTCTAAGTTGAATTATCTTTTTCTTAATGGCAATCGACTTTCTGGATCAATCCCTGCTTCCATCGGAAACTTGGCCAATTTGATAGGCCTTACACTTGATTCCAACCACCTTTCTGGACCCATTCCTTCTACCATTGGGAATATGACATTACTTAGCTACTTATTCCTTGGCCGGAATAATTTCTTTGGACAAATTCCTGCCTCTATTGGTAACCTCATCAATTTGGATACACTTGAACTTGAACGAAACAATTTCTCTGGCTATATTCCTGATACAATTGGAAACCTGAAACAGCTTACCAGACTAGATTTGTCCTTTAACAAGTTTAGTAGCAAACTTCCACAAACCATGAATAACTTTACCATTTTAGAGGACTTTCTAGTAACCGAATGTAATCTCACTGGCCATTTGCCAACTCAAATCTGCTTAGGTGGCTCATTAGTATACTTAAGTGCTGAAGGCAACCATTTTACTGGTCCAGTTCCAACAAGCTTGAAGAATTGCTCTAGTATTGTCAGAATTGCATTACATGGAAACCAAATAGAGGGAGACATAACAAAAGCTTTTGGCATATATCCAAATCTGAAGTATATTGATCTAAGTGATAATAAATTTTATGGCCAAATTTCTCCAGACTGGGGGAAGAGCCATAGTCTCTTGAACTTGATTATGTCCAACAATAATATTTCTGGCCATATACCAAAGCAAATTGCTGAGGCAGCTAAGCTAGGCAGGCTTCACCTTTCTTCAAACCAATTGACAGGACAGGTTCCAAAGGAGTTAGGGAGGTTGAAAAACCTGCTTGAACTTGAGATCAGTAACAATCATCTTTCAGGGAATATTCCATCAGAAATAGGATCACTCCAGAATCTTGAACGCTTGCATCTAGCAGGAAATGAGTTGAGTGGGAACATACCAACAGAAGTTGTTAAGTTACCTAACTTGTTGGAAATGAACTTGAGCAACAACAAGCTAGAGGGAAGCATCCCCGAGTTTCACATAACCCAAATTTTGTATTCTCTTGATCTTAGTGGGAATATGTTGCATGGACCAATACCAACAGTGCTTGGAGAGTTGAAACAATTGCAATTGCTGAACCTCTCTCACAATAATCTTTCTGGCACAATTCCATCAAGTTTTGATAGCATGTCAAGCTTGGTTTATCTCAACATATCATACAACCAGTTAGAAGGACCACTACCAAATAATGAAGCCTTTCTTCATGCTTCAATTGAATCATTGAAAAATAACAAAGGCTTGTGTGGTAATGTCACTGGCTTGGTGGCATGCCCAAGAATCAGTCCTATCCGCAAAAATCACAAGGTCGTGTTATTAGTATTACTTCTTGTCTTTGGAGTACTAATACTTGTACTTTGTGTGGTGGCTGTTTCAATGTATATTATTTGTAGAAGAGCCAGAATGAAAGAAGACCCTGCTAAGGAAGCAAAAGCAGAAGAACACTTTTCCATATGGAGCCATGATGGAAAAATGGCGTTCGAAACTATCATTGAAGCCACCAATAATTTTGATGACAAGTATCTCATTGGAATTGGAGGTCAAGGATCCGTATACAGAGCTGAGTTGCCAGGTAAGGTTGTTGCTGTGAAGAAACTTCACATGGAATCAGATGCGGATGATAAGTTCAATTCGAAGGCATTTGAAAATGAGATCAAAGCATTGACAGAAATGAAGCACCGAAACATCATAAAGCTGTATGGTTTTTGCCAGCATTCACAATTCTCATTTTTGGTGTACAAGTACTTGGACGGTGGCAGTTTGGATCATGTACTAGGTGATGAAAAGCAAGCAACTGCATTTGACTGGGAAAGGCGGGTGAATGTGGTTAAAGGAGTTGCTAATGCTTTGTCATATATGCATCATGGTTGCAAACCCCCTATAGTTCACCGCGACATATCAAGCAAGAATGTCCTTTTGGATTCAGAATATGAAGCTCATGTCTCTGATTTTGGGACAGTTAAGTTTCTACAGCCTGGTTCAAATTGGACCACACCTGCAGGAGTCACCTATGGCTATGGAGCTCCAGAGCTTGTTCAAACTATGGAAGTGACTGAAAAATGTGATGTATATAGTTTTGGAGTGCTTTGTTTCGAAATCCTTATGGGAAAGCATCCGGCAGATCTGATCAATTCATTGTTGTCGCCATCAACAGCATCAATAACATACAATTTGCTATTGGTTGATGTAATTGATCAAAGGCCTCCTCATCCTGAGAAGTCAGTTGTTGGGGAAATCATGTTGATCACAAAGTGGGCGCTTGAGTGTTTGAGCCAAAGTCCACAATTTCGGCCAACCATGCATCAAGTGTCTAAAGAACTCATGATGGGAAAATCATCTTTCTCTGACGACCACTTTCCCATGATCAGACTTGGACAACTCAATGAAGAGTTATTGGAATCTCCACTCGTGTGA 3222 0.4032 MNFIACSCRGIIILFIFLCVLVKLSSTYTMEANALLKWKASLDNQSKLTLSSWKNGTSPCRWKGIHCDKSRSITTMSLENFGLQGTLHTLNFSSFPNLLTINIYNNFFYGTIPPQIGNMSRVNRLNFSLNSFEGSIPKEMWTLRSLQMLDLSQCSSLSGPIPGSIANLTNLTYLDLGTNNFSGSIPHEIGKLVNLNSLAVNGNHLSGFIPQEIGRLTNLRLLYLSENTLNGTIPSVITNLSCLSALLLHNNTLSGLIPPSLWNMSKLNYLFLNGNRLSGSIPASIGNLANLIGLTLDSNHLSGPIPSTIGNMTLLSYLFLGRNNFFGQIPASIGNLINLDTLELERNNFSGYIPDTIGNLKQLTRLDLSFNKFSSKLPQTMNNFTILEDFLVTECNLTGHLPTQICLGGSLVYLSAEGNHFTGPVPTSLKNCSSIVRIALHGNQIEGDITKAFGIYPNLKYIDLSDNKFYGQISPDWGKSHSLLNLIMSNNNISGHIPKQIAEAAKLGRLHLSSNQLTGQVPKELGRLKNLLELEISNNHLSGNIPSEIGSLQNLERLHLAGNELSGNIPTEVVKLPNLLEMNLSNNKLEGSIPEFHITQILYSLDLSGNMLHGPIPTVLGELKQLQLLNLSHNNLSGTIPSSFDSMSSLVYLNISYNQLEGPLPNNEAFLHASIESLKNNKGLCGNVTGLVACPRISPIRKNHKVVLLVLLLVFGVLILVLCVVAVSMYIICRRARMKEDPAKEAKAEEHFSIWSHDGKMAFETIIEATNNFDDKYLIGIGGQGSVYRAELPGKVVAVKKLHMESDADDKFNSKAFENEIKALTEMKHRNIIKLYGFCQHSQFSFLVYKYLDGGSLDHVLGDEKQATAFDWERRVNVVKGVANALSYMHHGCKPPIVHRDISSKNVLLDSEYEAHVSDFGTVKFLQPGSNWTTPAGVTYGYGAPELVQTMEVTEKCDVYSFGVLCFEILMGKHPADLINSLLSPSTASITYNLLLVDVIDQRPPHPEKSVVGEIMLITKWALECLSQSPQFRPTMHQVSKELMMGKSSFSDDHFPMIRLGQLNEELLESPLV* 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2582 1073 Gene3D Phosphorylase Kinase; domain 1 734 851 - -
Amo04g2582 1073 SUPERFAMILY L domain-like 413 686 - -
Amo04g2582 1073 ProSiteProfiles Protein kinase domain profile. 773 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2582 1073 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 11 168 - -
Amo04g2582 1073 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 246 1063 - -
Amo04g2582 1073 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 155 258 - -
Amo04g2582 1073 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Amo04g2582 1073 Pfam Leucine rich repeat 217 277 IPR001611 GO:0005515
Amo04g2582 1073 Pfam Leucine rich repeat 315 373 IPR001611 GO:0005515
Amo04g2582 1073 Pfam Leucine rich repeat 602 660 IPR001611 GO:0005515
Amo04g2582 1073 SMART LRR_typ_2 336 359 IPR003591 -
Amo04g2582 1073 SMART LRR_typ_2 264 288 IPR003591 -
Amo04g2582 1073 SMART LRR_typ_2 647 672 IPR003591 -
Amo04g2582 1073 SMART LRR_typ_2 168 192 IPR003591 -
Amo04g2582 1073 SMART LRR_typ_2 623 646 IPR003591 -
Amo04g2582 1073 SMART LRR_typ_2 216 240 IPR003591 -
Amo04g2582 1073 SMART LRR_typ_2 576 600 IPR003591 -
Amo04g2582 1073 SMART LRR_typ_2 528 552 IPR003591 -
Amo04g2582 1073 SMART LRR_typ_2 360 384 IPR003591 -
Amo04g2582 1073 Pfam Protein kinase domain 775 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2582 1073 Gene3D Ribonuclease Inhibitor 358 695 IPR032675 -
Amo04g2582 1073 Gene3D Ribonuclease Inhibitor 289 357 IPR032675 -
Amo04g2582 1073 Gene3D Ribonuclease Inhibitor 186 285 IPR032675 -
Amo04g2582 1073 PANTHER LRR RECEPTOR-LIKE KINASE 155 258 - -
Amo04g2582 1073 PANTHER LRR RECEPTOR-LIKE KINASE 246 1063 - -
Amo04g2582 1073 PANTHER LRR RECEPTOR-LIKE KINASE 11 168 - -
Amo04g2582 1073 SUPERFAMILY Protein kinase-like (PK-like) 757 1043 IPR011009 -
Amo04g2582 1073 ProSitePatterns Tyrosine protein kinases specific active-site signature. 897 909 IPR008266 GO:0004672|GO:0006468
Amo04g2582 1073 SUPERFAMILY RNI-like 76 443 - -
Amo04g2582 1073 Gene3D Transferase(Phosphotransferase) domain 1 852 1055 - -
Amo04g2582 1073 Gene3D Ribonuclease Inhibitor 28 185 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2582 Amo-Chr4 98835052 98838393 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2582 11 945 Receptor kinase-like Gene Family AT4G08850 43.382 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo04g2582 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2582 - - aip:107635237 1397.1