Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2578 ATGAGCTGTTATAATATTTTCCTTCCACTTCTTGTTTCATCATTTCTTCTTTTCACTTTCTTGCCGGGAGCTGCCCATGGTAGCAAAAAGTGCTACATTGTGTACTTGGGAGCACATTCTCATGGTCCAACCCCTACTTCTCTTGACTTGGAAACCGCCACATATTCTCATTATGATTTGCTAGGTTCAGTTTTGGGAAGCCATGAGAAAGCGAAAGAGGCCATGATATACTCATACAATAAGCACATCAACGGCTTTGCCGCTTTACTTGACGAGGATGAAGCAGCAATCATTGCAGAAAACCCAAATGTGGTTTCTGTGTTCGTGACCAAAAAGCACAAATTGCACACAACACGGTCGTGGGAATTTCTTGGACTACACAGAAATGACAAGAACTCAGCATGGCCAAAGGGAAGGTTTGGTGAAAATACAATAATCGCCAACATTGATACAGGCGTTTGGCCAGAATCCACGAGTTTCGATGACACGGGATATGGCCCCATCCCATCAAAATGGCGCGGGGGTAACGTCTGTCAAATAAATAACTTCCAGAGTCCTAGGAAAAAGCATTGCAACAGGAAGTTGATTGGAGCAAGATTTTTCATCGGAACTTTCGAGGCATACTATGGGAAACTTGACGAGAAGTTGAAGACAGCTCGTGACTTTGTAGGGCACGGGACACACACTTTATCGACAGCAGGTGGCAACTTCGTGGAAGGAGCAAGCGTATTCGCGGTTGGGAATGGCACAGCAAAGGGTGGGTCTCCAAGAGCCAGGGTTGCAGCCTACAAAGTCTGTTGGTCTCTACAGGATGCATCAGATTGCTTTGGGGGAGATATCTTGTCCGCAATCGACCAGGCCATAAACGACGGTGTTGATATCATCTCCATCTCCATCGGCGACCAATATTTAGTGCACCCTGAAGATATATTCACCGATGAGATATCCATTGGTTCATTCCATGCTATTTCTAACAACATATTGTTCGTTGCCTCTGGCGGAAATGACGGACCAACACCTAGAACCGTCGCTAATGTGGCTCCCTGGATATTCACGGTTGCTGCTAGCACAACAGATAGAAACTTTAGTAGTACCATTACTTTTGGTAACGGTCAACAAATCACGGGAGCCACTTTATTCGTAGACTTGCCACCTAACCACGCCTTTCCTGTGATTCTTGCTGCTGATGGTAAACTTGCCAATGCCACAACTCGAGATGCTTCACTTTGTAGGCAAGGGACACTTGACCCAGCAAAAGTCCGCGGAAAAATAGTGGACTGCCTGAGGGAAGGAAAAATAAAATCAGTTTCGGAGGGTTTGGAAGCTCTGAAAGCAGGTGCCAGGGCAATACTCCTGGAAAATCAAGAGCAAAATGGGGAGACAACTCTTGCTGAGCCTCACATTATGACCGGTGTGAGTAGTCCACCTCTAACAAAAAAAGATGTCAAAAAGGAAAAACCACCAGGCCCAGGTTTTCATGACGCTGCTGCCAATGATATTTCAATAACCTTGCCTACAACAATAATGTTCTCCCCAGTACATACATTCTTTAATATAAAACCAGCTCCAGTTATGGCTTCATTCTCCTCTAGAGGACCGAGTCAAATTCAGCCATCAATACTCAAGCCTGATATTACAGCACCAGGAACAAACATACTTGCTGCCTACTCACTATTCGCTAGTGCGTCTGACATACTAGTAGATGGTCGTCGAGGGTTTCGATTCAATGTGCTGCAAGGAACATCTATGTCTTGCCCTCATATAACTGGAGTTGCCGGACTTCTCAAAACTCTTCATCCTCACTGGAGTCCCGCTGCTATTAAGTCTGCAATCATGACCACCGCAACTACACTAGACAACTCAAACGGCCCTATCAAAGATGCATTTGATGATAAGCTAGCGAATTCTTTTGCTTATGGATCAGGACATGTTCGACCAAACCTTGCAATAGATCCAGGACTTGTTTATGATCTGCACCTTGACGATTATTTGAACTTCTTATGTGCCTCTGGATACAATCAACAAGCCATTTCAGCACTTAATTTCAACAGGACTTTCACTTGCAAAGGAAATCACAGCATAGACGACTTGAATTACCCTTCAATCACATTGCCAAATCTAAAGTTGAGTCCAGAAACTGTTACTCGTACACTCACCAATGTGGGTCCCCCAGGCACATATAACGTTACTGCCAAAGTGGACGGATGCAAAATTACTGTTGTGCCCAATTCCTTGACTTTTACTAAATTAAATGAAAAGAAAACCTTCAAGGTTACTGTGCAAGCATCAAGTGTGATTCAGAGTTATAAATATCAATTTGGTGAATTGATATGGACAGATGGAAAGCACAGAGTCAGGAGTCCTATTACAATCCGACGCCGCAAATGA 2388 0.4418 MSCYNIFLPLLVSSFLLFTFLPGAAHGSKKCYIVYLGAHSHGPTPTSLDLETATYSHYDLLGSVLGSHEKAKEAMIYSYNKHINGFAALLDEDEAAIIAENPNVVSVFVTKKHKLHTTRSWEFLGLHRNDKNSAWPKGRFGENTIIANIDTGVWPESTSFDDTGYGPIPSKWRGGNVCQINNFQSPRKKHCNRKLIGARFFIGTFEAYYGKLDEKLKTARDFVGHGTHTLSTAGGNFVEGASVFAVGNGTAKGGSPRARVAAYKVCWSLQDASDCFGGDILSAIDQAINDGVDIISISIGDQYLVHPEDIFTDEISIGSFHAISNNILFVASGGNDGPTPRTVANVAPWIFTVAASTTDRNFSSTITFGNGQQITGATLFVDLPPNHAFPVILAADGKLANATTRDASLCRQGTLDPAKVRGKIVDCLREGKIKSVSEGLEALKAGARAILLENQEQNGETTLAEPHIMTGVSSPPLTKKDVKKEKPPGPGFHDAAANDISITLPTTIMFSPVHTFFNIKPAPVMASFSSRGPSQIQPSILKPDITAPGTNILAAYSLFASASDILVDGRRGFRFNVLQGTSMSCPHITGVAGLLKTLHPHWSPAAIKSAIMTTATTLDNSNGPIKDAFDDKLANSFAYGSGHVRPNLAIDPGLVYDLHLDDYLNFLCASGYNQQAISALNFNRTFTCKGNHSIDDLNYPSITLPNLKLSPETVTRTLTNVGPPGTYNVTAKVDGCKITVVPNSLTFTKLNEKKTFKVTVQASSVIQSYKYQFGELIWTDGKHRVRSPITIRRRK* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2578 795 Pfam Fibronectin type-III domain 696 791 IPR041469 -
Amo04g2578 795 ProSitePatterns Serine proteases, subtilase family, serine active site. 580 590 IPR023828 -
Amo04g2578 795 Gene3D - 667 794 - -
Amo04g2578 795 Gene3D Peptidase S8/S53 domain 144 663 IPR036852 GO:0004252|GO:0006508
Amo04g2578 795 Gene3D - 359 517 - -
Amo04g2578 795 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Amo04g2578 795 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Amo04g2578 795 PRINTS Subtilisin serine protease family (S8) signature 579 595 IPR015500 -
Amo04g2578 795 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 792 - -
Amo04g2578 795 Pfam Peptidase inhibitor I9 32 109 IPR010259 -
Amo04g2578 795 ProSiteProfiles Serine proteases, subtilase domain profile. 120 650 - -
Amo04g2578 795 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 792 IPR045051 -
Amo04g2578 795 Pfam Subtilase family 141 622 IPR000209 GO:0006508|GO:0008236
Amo04g2578 795 MobiDBLite consensus disorder prediction 468 489 - -
Amo04g2578 795 CDD PA_subtilisin_like 365 472 - -
Amo04g2578 795 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 116 IPR037045 -
Amo04g2578 795 CDD Peptidases_S8_3 113 616 IPR034197 -
Amo04g2578 795 SUPERFAMILY Subtilisin-like 115 654 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2578 Amo-Chr4 98808460 98813870 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2578 32 792 Subtilisin-like Serine Gene Family AT2G04160 51.108 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2578 - - gmx:100813564 1135.55