Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2571 ATGCCACCAATAATGTTCCAAAATACTACTATTGTCTTAACATTCCTTTGTGTCCTTATTCTAAAACTCTCTTCAGCTGATCAAAACATTGAAGCAGATGCACTCTTAAAGTGGAAGGCCACACTTGAGAAGCAAAGCCAAGTTATGTTATCATCTTGGAACAACGGCACAAGTCCATGCAGATGGAAAGGGATTCAATGTGACAAATCAAAGTCAATCACAACCATCAATCTTGAAAACTTTGGACTCAAAGGTACACTTCACAGTCTTAGTTTCTCTTCATTCCCCAACCTCATTTCCATAAACATATACAACAACTTGTTCCATGGAACCATTCCACCACAAATTGCTAACGTGTCCAAAGTTAACAGCTTGAACATGTCTTCAAATCTTTTTGATGGTTCTATCCCTAAAGAGTTGTGGACATTGAGCAGTTTACAGAGTCTTGATCTTTCTTTGTGCCATCTAAGTGGATCAATCCCAGGTTCCATTTCGAATTTGGCCAACTTATCATTTCTAGATTTATCTGATAATTACAATCTGTCAGGCCTAATTCCACCTGAGATTGGTAAACTGAACAAACTTGTGTTTCTTGGGATTGGAAACAATCAAATCTCTGGCTCCATTCCCCAAGAAATTGGAATGTTAACAAAGCTTGAGTATCTTGAATTATCAAGAAACACTCTTTCTGAAAACTTGGTCAATCTGGAGTTACTTGAAATTGAGAAGAACCATTTTTCAGGATCCATTCCTTCCACAATTGGAAACATGACAAAGCTCACCTGGATATTTCTTCGCCACAATAATTTTTCTGGCGAAATTCCTAGCTCCATTGGTAATTTGATCAATTTGATCACCCTTGCTCTTCAAGGAAACAATCTATCAGGAGCTATTCCTGATACAGTTGGAAAGTTGAAAAGCCTATACTCTTTAGAATTGTCTGCCAACAAACTCAGTGGTAGCATTCCACAAGTTATCAATAACCTTACCAACATGGTTTACTTTTTGGTAGAAGAAAATGATCTCTCCGGCCACTTGCCACCTCAAATTTGCTTAGGTGGTTCATTAGGATACTTGATTGCTGGTAACAATCATTTTACTGGTCCAATTCCAAGTAGCTTGAAGAACTGCTCTAATCTTGCTAGAATTAGGTTAGAGTATAACCATTTGGAAGGAGACCTAACACAAGACTTTGGTATGTATCCTAATTTGAAATTCATTGATCTGAGTGACAATAAATTATATGGCCAAATTTCGCCAGATTGGGGGAAGTGCCAAAATCTTGAAAACTTGATAATATCCAACAATAACATTTCTGGTGGCATACCATCAGAAATTGGTGAACTTACCAACTTGGGAAGACTTCACCTTTTCTCCAACCAATTAACTGGAAAGATTCCAAGAGAATTGGGAAATATGAAAAGCCTGCTTGAATTCAAGATCAGTGACAACCATTTCTCAGGAAATATTCCAGCAGAAATAGGACTATTGCATGATCTTCAAATCTTGCACCTTGGAGGAAATGAGTTGAGTGGCAATATACCAAGACAAGTTGTGCAGTTACCCAACTTGTTGGAATTGAACTTGAGCAACAACAAACTACAGGGAAGCATCCCCTCTGACTTCCAGTCGTCGCAGCCTCTGTATTCTCTTGATCTTAGTGGGAATATGTTGCATGGACAAATACCAACAGTGCTTGGAGAGTTGAAACAATTGAAATTGTTGAACCTCTCTCACAACAATCTTTCTGGCACCATTCCATCAAGTTTTAATGGTATGTCAAGCTTGATTTCTGTCAACATATCATACAACCAGTTAGAAGGGCCGCTTCCAGACAATAACCGAGCCTTTCAGAATGCTACGATTGAATCATTGAAAAATAACAAAGGCTTGTGTGGTAATATCACTGGCTTGGTGCCATGCCCAAGCAGCAGTCCTAGCCGTAAAAGTCACAAGGTCATGTTATTGGTATTACTTGTTATATTTGGAGTACTAGTACTTGTGCTTTGTATGGCGGCTGTTTCATTGTACTTTCTTTGTAGAAGTGCTAGAAACAAAGACAACTCAGCTAAAGAAGTGCAACAAGTGGAAGAACACTTTTCCATATGGAGCCATGATGGAAAAATGGCGTTTGAAACTATCATTGAAGCTACCAATAACTTTGATGAGAAACATCTCATTGGAATTGGAGGGCAAGGATCCGTTTACAGGGCTGAGTTGCCTTCAGGAATGGTTGTTGCTGTGAAGAAACTTCATACTGAATCAGATGCAGAGGATAAGTCCAATTTGAAAGCTTTTGAGAATGAAATTGAAGCATTGACAGAAATGAGGCACCGCAACATCATAAAGCTATATGGATTCTGCCAGCATTCTCGGTTCTCTTTTTTGGTTTATGAATTCTTGGAAGGTGGCAGTTTGGATCAAGTATTTGGCAATGAAGCAAAAGCAAGTGCATTTGATTGGATGAAGAGGGTGAATGTGGTTAAAGGAGTTGCTAATGCTTTGTCATACATGCATCATGATTGCAAACCCCCTATGGTTCATCGCGACATATCAAGCAAGAACATTCTATTGGACTCAGAATATGAAGCTCATGTCTCTGACTTTGGGACTGCTAAGTTTTTAAAGCCAGATTCAAATTGGACCACACTTGCAGTCACCTATGGTTATGGAGCTCCAGAGCTAGCTCAGACTATGGAAGTGACAGAGAAATGTGATGTATATAGCTTTGGAGTTCTTAGTTTGGAGATCCTCATGGGAAAGCATCCAGGAGATTTGATCAACTCATTGTTGTCACCATCAACAGCATCAATAACATACAATTTGTTATTGGTTGATGTCATAGATCATAGACCTCCTTATCCTAAGAACTCAATTGTTGGGGAAATCATGTGGATCACAAAGTGGGCACTTGAGTGCTTGAGCCAAAGTCCACAATTTCGGCCAACCATGCATCAAGTTTCTAAAGAGCTTATGATGGGAAAAGCACCTTTACCTGATGACCAATTTCCTATGATCAGGATTGGACAACTCAATGAAGAATGGGAAACTCCACTTATTTGA 3063 0.3908 MPPIMFQNTTIVLTFLCVLILKLSSADQNIEADALLKWKATLEKQSQVMLSSWNNGTSPCRWKGIQCDKSKSITTINLENFGLKGTLHSLSFSSFPNLISINIYNNLFHGTIPPQIANVSKVNSLNMSSNLFDGSIPKELWTLSSLQSLDLSLCHLSGSIPGSISNLANLSFLDLSDNYNLSGLIPPEIGKLNKLVFLGIGNNQISGSIPQEIGMLTKLEYLELSRNTLSENLVNLELLEIEKNHFSGSIPSTIGNMTKLTWIFLRHNNFSGEIPSSIGNLINLITLALQGNNLSGAIPDTVGKLKSLYSLELSANKLSGSIPQVINNLTNMVYFLVEENDLSGHLPPQICLGGSLGYLIAGNNHFTGPIPSSLKNCSNLARIRLEYNHLEGDLTQDFGMYPNLKFIDLSDNKLYGQISPDWGKCQNLENLIISNNNISGGIPSEIGELTNLGRLHLFSNQLTGKIPRELGNMKSLLEFKISDNHFSGNIPAEIGLLHDLQILHLGGNELSGNIPRQVVQLPNLLELNLSNNKLQGSIPSDFQSSQPLYSLDLSGNMLHGQIPTVLGELKQLKLLNLSHNNLSGTIPSSFNGMSSLISVNISYNQLEGPLPDNNRAFQNATIESLKNNKGLCGNITGLVPCPSSSPSRKSHKVMLLVLLVIFGVLVLVLCMAAVSLYFLCRSARNKDNSAKEVQQVEEHFSIWSHDGKMAFETIIEATNNFDEKHLIGIGGQGSVYRAELPSGMVVAVKKLHTESDAEDKSNLKAFENEIEALTEMRHRNIIKLYGFCQHSRFSFLVYEFLEGGSLDQVFGNEAKASAFDWMKRVNVVKGVANALSYMHHDCKPPMVHRDISSKNILLDSEYEAHVSDFGTAKFLKPDSNWTTLAVTYGYGAPELAQTMEVTEKCDVYSFGVLSLEILMGKHPGDLINSLLSPSTASITYNLLLVDVIDHRPPYPKNSIVGEIMWITKWALECLSQSPQFRPTMHQVSKELMMGKAPLPDDQFPMIRIGQLNEEWETPLI* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2571 1020 SUPERFAMILY Protein kinase-like (PK-like) 700 991 IPR011009 -
Amo04g2571 1020 SUPERFAMILY RNI-like 289 623 - -
Amo04g2571 1020 ProSitePatterns Tyrosine protein kinases specific active-site signature. 846 858 IPR008266 GO:0004672|GO:0006468
Amo04g2571 1020 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 10 172 - -
Amo04g2571 1020 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 155 230 - -
Amo04g2571 1020 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 231 1011 - -
Amo04g2571 1020 PANTHER LRR RECEPTOR-LIKE KINASE 10 172 - -
Amo04g2571 1020 PANTHER LRR RECEPTOR-LIKE KINASE 155 230 - -
Amo04g2571 1020 PANTHER LRR RECEPTOR-LIKE KINASE 231 1011 - -
Amo04g2571 1020 Gene3D Transferase(Phosphotransferase) domain 1 801 998 - -
Amo04g2571 1020 Gene3D Ribonuclease Inhibitor 28 181 IPR032675 -
Amo04g2571 1020 Pfam Leucine rich repeat 548 606 IPR001611 GO:0005515
Amo04g2571 1020 SMART LRR_typ_2 569 592 IPR003591 -
Amo04g2571 1020 SMART LRR_typ_2 143 167 IPR003591 -
Amo04g2571 1020 SMART LRR_typ_2 521 544 IPR003591 -
Amo04g2571 1020 SMART LRR_typ_2 257 281 IPR003591 -
Amo04g2571 1020 SMART LRR_typ_2 216 239 IPR003591 -
Amo04g2571 1020 SMART LRR_typ_2 449 473 IPR003591 -
Amo04g2571 1020 SMART LRR_typ_2 305 329 IPR003591 -
Amo04g2571 1020 Pfam Protein kinase domain 722 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2571 1020 Gene3D Ribonuclease Inhibitor 308 643 IPR032675 -
Amo04g2571 1020 Gene3D Ribonuclease Inhibitor 182 234 IPR032675 -
Amo04g2571 1020 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Amo04g2571 1020 Gene3D Phosphorylase Kinase; domain 1 680 800 - -
Amo04g2571 1020 Gene3D Ribonuclease Inhibitor 235 307 IPR032675 -
Amo04g2571 1020 SUPERFAMILY L domain-like 47 348 - -
Amo04g2571 1020 ProSiteProfiles Protein kinase domain profile. 721 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2571 Amo-Chr4 98733582 98736907 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2571 31 893 Receptor kinase-like Gene Family AT4G08850 44.250 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo04g2571 Pkinase 8.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2571 - - aip:107635237 1292.33