Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo04g2570 | ATGAACAATTGTAATCTTTACCTTCGAATTTGTTACATTGTATACATGGGAGCACATTCTCATGGCCCAAGCCCTACCTCTTTTGATATGGAAGCTGCCACAAATTCTCACTTTGATTTACTAGCTTCAGTTTTGGGAAGCAATGAGAAAGCGAAAGAAGTGATGATATACTCATACAATAAGCACATCAATGGGTTCTCCGCGCTACTTGAAGAGGAAGAAGCAGCACTTATTGCCATAAAACCAAATGTAGTGTCGGTGTTCTTGAGCAAGGAGCACAAACTTCACACAACAAGGTCATGGGAATTTCTTGGACTTCGCAGAAATGCTAAGAACACTGCATGGCAAAAGGGTAGATTTGGTGAAAATACAATCATCGCCAACATTGACACTGGGGTATGGCCGGAATCGAGAAGCTTCAGTGACAAAGGATATGGCTCTGTCCCCTCAAAATGGCGTGGGGGTAATGTTTGTCAAATAGACAGCCTCCCTGGCTCTAGAAAAAATCCTTGCAACAGGAAGCTTATTGGAGCAAGATACTTCAGCAATGCTTATGAAGCGAGTGTTGGGGAGCTGAACCCAAAGTTGCATACAGCGCGTGATTTCGAAGGCCACGGTACCCACACACTATCAACCGCCGGTGGTAATTTCGTGCCCGGTGCACACGTATTTGCGGTTGGAAACGGCACTGCAAAGGGAGGATCCCCAAGAGCAAGAGTTGCAGCTTATAAGGTTTGTTGGTCCATAACCGATCCTGCCAGTTGCCATGAAGCTGATGTGCTGGCAGCAATAGACCAAGCCATAGCCGACGGCGTCGATATCATCTCCCTCTCCGCCGGTGGCCGCCAAGTTGTCAGCCCAGAAGATATATTCACTGATGCTGTCTCCCTTGGAGCCTTCCATGCAATTTCTGCCAATATTTTGTTAGTTGCTTCTGCTGGGAATGATGGCCCAACTCCTGCAACTGTTGTCAATGGAGCTCCATGGATATTCACCGTTGCTGCTAGCACCCTCGATAGAGATTTCAGCAGTACCATTACCCTTGATAACGGTCAACAAATCACGGGAGGGAGTCTTTCTGTAATGTTACAATCTAACCAAGCCTTTTCTTTGATCTCTTCTACCGATGCTAAACATGCCAATGCGACAATTCGAGATGCTCAACTTTGTAAGGCAGGAACACTTGACCCTGCAAAAGTTAAAGGCAAAGTGGTGAATTGCCTTAGAGGAGGGAATATAAAATCCGTTGGTGAGGGTTTGGAAGCTTATTCGGCAGGTGCAATGGGAATGTTGTTGCAAAATCAAAAGAAACAGGGGAAAACACTTACCAATGAGGCTCATATGTTGACTACTGTGGACTATGCACCACCACCTCCATCTCCACCTACCTCTTCTCAACCACTACGCAAGCCCAATTATGATCTCATAACTACTACAGCTCTAAGCCCGCCGACCCCGCCCACCACAGTAAGGCTCTCCCAAGCCAAAACAGTGATTGGAAGGAAGCCAGCTCCAGTTATGGCTTCCTACTCCTCTAGAGGACCCAATAAGATTCAACCATCAATACTCAAGCCTGATGTGACTGCACCTGGAGTAAACATACTTGCTGCCTATTCACTCTTCGCAAGTGCCTCTGGCCTCTTAGTGGATACTCGTCGTGGCTTTCAATTTAATGTGCTGCAAGGAACTTCTATGTCTTGCCCTCATGTTTCTGGTATTGCTGCACTTGTCAAAACTCTTCATCCTAATTGGAGTCCTGCAGCCATTAAATCCGCAATCATGACTACTGCAACCACACTTGACAACACGAACAAGCCAATTCAAGATGCGTTTGACAATGAGTTAGCAACTCCTTTTGCTTATGGCTCAGGACATGTGCAACCTAACCTTGCAGTTGACCCTGGACTTGTTTATGATCTACACCTTAACGATTATTTGAACTTCTTATGTGCTTCAGGATACGACCAACAAGCTGTTTCAGCACTTAATTTCAACAACACTTTTGTTTGTAAAGGAACTCACAGTATAAATGACTTAAACTATCCTTCAATCACATTGCCAGATCTTAAATTGAGTGCGGTAACGGTTACGCGTACACTCACCAATGTGGGGCCCCCTGGAACATACAATGCAAGTGCCAGATTGGATGGATACAAAATTAATGTTGTTCCCAGTTCCTTAACTTTTACAAAAATTAATGAAACGAAGACATATAAGGTGATTGTGCAGGCATCAAGTGTGAGTCAACTTTATAAATACCAATTTGGTGAAGTGATTTGGACAGATGGAAAGCATAGAGTTAGAAGTCCAATTGCAGTCCAACGCCGCAAGTGA | 2334 | 0.4482 | MNNCNLYLRICYIVYMGAHSHGPSPTSFDMEAATNSHFDLLASVLGSNEKAKEVMIYSYNKHINGFSALLEEEEAALIAIKPNVVSVFLSKEHKLHTTRSWEFLGLRRNAKNTAWQKGRFGENTIIANIDTGVWPESRSFSDKGYGSVPSKWRGGNVCQIDSLPGSRKNPCNRKLIGARYFSNAYEASVGELNPKLHTARDFEGHGTHTLSTAGGNFVPGAHVFAVGNGTAKGGSPRARVAAYKVCWSITDPASCHEADVLAAIDQAIADGVDIISLSAGGRQVVSPEDIFTDAVSLGAFHAISANILLVASAGNDGPTPATVVNGAPWIFTVAASTLDRDFSSTITLDNGQQITGGSLSVMLQSNQAFSLISSTDAKHANATIRDAQLCKAGTLDPAKVKGKVVNCLRGGNIKSVGEGLEAYSAGAMGMLLQNQKKQGKTLTNEAHMLTTVDYAPPPPSPPTSSQPLRKPNYDLITTTALSPPTPPTTVRLSQAKTVIGRKPAPVMASYSSRGPNKIQPSILKPDVTAPGVNILAAYSLFASASGLLVDTRRGFQFNVLQGTSMSCPHVSGIAALVKTLHPNWSPAAIKSAIMTTATTLDNTNKPIQDAFDNELATPFAYGSGHVQPNLAVDPGLVYDLHLNDYLNFLCASGYDQQAVSALNFNNTFVCKGTHSINDLNYPSITLPDLKLSAVTVTRTLTNVGPPGTYNASARLDGYKINVVPSSLTFTKINETKTYKVIVQASSVSQLYKYQFGEVIWTDGKHRVRSPIAVQRRK* | 778 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo04g2570 | 777 | Pfam | Subtilase family | 121 | 604 | IPR000209 | GO:0006508|GO:0008236 | |
| Amo04g2570 | 777 | Pfam | Fibronectin type-III domain | 678 | 773 | IPR041469 | - | |
| Amo04g2570 | 777 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 7 | 774 | IPR045051 | - | |
| Amo04g2570 | 777 | Gene3D | - | 649 | 776 | - | - | |
| Amo04g2570 | 777 | PRINTS | Subtilisin serine protease family (S8) signature | 561 | 577 | IPR015500 | - | |
| Amo04g2570 | 777 | PRINTS | Subtilisin serine protease family (S8) signature | 121 | 140 | IPR015500 | - | |
| Amo04g2570 | 777 | PRINTS | Subtilisin serine protease family (S8) signature | 201 | 214 | IPR015500 | - | |
| Amo04g2570 | 777 | Gene3D | Peptidase S8/S53 domain | 124 | 645 | IPR036852 | GO:0004252|GO:0006508 | |
| Amo04g2570 | 777 | Pfam | Peptidase inhibitor I9 | 12 | 96 | IPR010259 | - | |
| Amo04g2570 | 777 | Gene3D | - | 339 | 499 | - | - | |
| Amo04g2570 | 777 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 100 | 632 | - | - | |
| Amo04g2570 | 777 | CDD | Peptidases_S8_3 | 93 | 598 | IPR034197 | - | |
| Amo04g2570 | 777 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 8 | 96 | IPR037045 | - | |
| Amo04g2570 | 777 | SUPERFAMILY | Subtilisin-like | 95 | 636 | IPR036852 | GO:0004252|GO:0006508 | |
| Amo04g2570 | 777 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 562 | 572 | IPR023828 | - | |
| Amo04g2570 | 777 | PANTHER | TRIPEPTIDYL-PEPTIDASE II-RELATED | 7 | 774 | - | - | |
| Amo04g2570 | 777 | CDD | PA_subtilisin_like | 345 | 455 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo04g2570 | Amo-Chr4 | 98715847 | 98721237 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo04g2570 | 12 | 774 | Subtilisin-like Serine Gene Family | AT2G04160 | 50.777 | 0.0 | 739 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo04g2570 | - | - | adu:107486040 | 1153.66 |