Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2563 TATATCTTTTACCTTCATCTTCTTGTTTTATCTTTTCTTCTTTCTACTTTCTTTCTGAATGCTGCACAAGCCACCAAAAAGTGCTACATTGTGTACTTGGGAGCACATTCTCATGGTCCAAACCCTTCGTCTTATGACCTTGAATCCGCTACAAATTCTCATCATGATTTACTAACTTCAACCTTGGGAAGCCATGAGAAGGCCAAAGAAGCAATTATTTATTCATATAATAAACACATAAATGGCTTTGCTGCACTACTTGAAGAGGAAGAAGCAGCACAAATTGCAAAAAACCCAAATGTTGTGTCAGTGTTCTTGAGCAAAGAGTATAAACCACACACTACACGTTCATGGGAGTTTCTTGGACTGCACAGGAGGAATGGTATGAACACAGCATGGCAGAAAGGGAGATATGGTGAAAATACAATCATAGCTAACATTGATACAGGTGTTTGGCCTGAATCTAAGAGTTTTAGTGACAAAGGAATAGGCCCTGTTCCAACAAAATGGCGTGGCGGTAATGTGTGTGAAATTAGCAAAGTTCGTAGTTCAAAAAAAACTCCATGCAACAGGAAACTAATCGGAGCAAGATACTTCAGCAAAGGTTATGAGGCAAGCATAGGCAAAATTGCGCCATCACAGCACACGGCACGTGACTTCGAAGGCCATGGCACCCACACTCTATCAACGGCCGGAGGCAACTTCGTACCCGGCGCAAGCGTTTTCGGCAACGGCAACGGCACCGCAAAGGGTGGATCACCAAGAGCCAGGGTTGCAGCCTTCAAGGTGTGCTGGTCAACGATAGACGAGACAAGCTGCCATGGCGCAGACGTGTTGTCCGCCATTGACCAAGCCATCAGCGACGGCGTTGACGTCATCTCCATTTCGGCTGGTGGCAGAACAGAGGTAAACCCTAATGAGATATTCACCGATGAGGTGTCCATAGGAGCGTTCCATGCGCTTTCAAGAAACGTTGTTGTTGTTGCTTCGGCGGGTAATGAAGGACCCACACCTTCAAGTGTTGTCAACGTGGCTCCATGGGTGTTCACGGTTGCTGCTAGCACCATTGATAGGGACTTCAGCAGTAACGTAACTCTTGGTAACAATCAACAAGTCACGGGAGCCAGTCTTTTCGTAAATTTACCATCCAGTCAATCCTTTCCTCTCATCCTTGCATCTGATGCTAGATTTGCTAATGCCACAATTCAAAACGCTCAACTTTGTATGCCTGGAACACTTGATCCAGCAAAAGCAAGGGGCAAAATAGTCATGTGCCTTCGAGGTGGGAAAATAAGGTCGGTTGCTGAAGGCCAAGAAGCTTTATCTGCAGGTGCAGTTGGAGTGGTTATGGAAAACGATGCTCAAAGTGGAAACACAGTTCTAGCTGAGCCTCATGTTTTGTCCACTACAAATGTCCCCAAAAATAATCAGGACAAAAATGTTCATGATTATTACAACAGTACCACGAGCCCTACTATTAACATGTCTGCAGCAAGAACATTGCTTGGAACAAAGCCAGCACCAGTTATGGCCTCATTCTCATCTAGAGGTCCAAATCCAATTCAACCATCAATACTCAAGCCTGATATAACTGCACCAGGGGTGAACATACTAGCTTCATATTCCTTAGCAGCAAGTGCATCTAACTTGCCATCAGACACACGCCGCGGGTTCCGGTTCAATGTGCTACAAGGAACTTCCATGTCATGCCCTCATATCTCTGGTGTTGCTGGTCTTCTCAAAACTCGTCATCCAAATTGGTCTCCAGCAGCTATTAAATCCGCAATCATGACCACAGCAACTACTCAAGATAACACCAATGGAGCTATACAAGATGCATTTGATAATACATTAGCCACACCTTTTGCTTATGGTTCAGGGCATGTTCAACCAGACTTAGCCATGGACCCTGGACTTGTTTATGACATTACCATTCTTGATTACTTGAGCTTCTTATGTGCTTCTGGATACAGTCAAAACCTCATTTCATCACTCAATTCCAACAAGAACTTCATATGCTCTGGATCTGACAGAGTAACAGACTTAAATTACCCTTCAATCACATTGCCAAATCTCGGATCTGACGCAGAGAATGTTACTCGCACGGTTACTAATGTTGGACCTCCAGGAACATATGTTGCAAATGCAAAGTTGCCAGGATTTAACACTGTTGTGGTGCCAAGTTCCTTAACGTTCAAGAGACTTCGCCCCTGGTTCCAAGTAATTGTGAAGGCAAGAAGTGTGAGTCAGAATGGGAATTATCAATTTGGAGAGTTGAAATGGACAAATGGGAAGCACATTGTTAGAAGTCCAATTGTTGTGAGGCGCACATCATGA 2337 0.4433 YIFYLHLLVLSFLLSTFFLNAAQATKKCYIVYLGAHSHGPNPSSYDLESATNSHHDLLTSTLGSHEKAKEAIIYSYNKHINGFAALLEEEEAAQIAKNPNVVSVFLSKEYKPHTTRSWEFLGLHRRNGMNTAWQKGRYGENTIIANIDTGVWPESKSFSDKGIGPVPTKWRGGNVCEISKVRSSKKTPCNRKLIGARYFSKGYEASIGKIAPSQHTARDFEGHGTHTLSTAGGNFVPGASVFGNGNGTAKGGSPRARVAAFKVCWSTIDETSCHGADVLSAIDQAISDGVDVISISAGGRTEVNPNEIFTDEVSIGAFHALSRNVVVVASAGNEGPTPSSVVNVAPWVFTVAASTIDRDFSSNVTLGNNQQVTGASLFVNLPSSQSFPLILASDARFANATIQNAQLCMPGTLDPAKARGKIVMCLRGGKIRSVAEGQEALSAGAVGVVMENDAQSGNTVLAEPHVLSTTNVPKNNQDKNVHDYYNSTTSPTINMSAARTLLGTKPAPVMASFSSRGPNPIQPSILKPDITAPGVNILASYSLAASASNLPSDTRRGFRFNVLQGTSMSCPHISGVAGLLKTRHPNWSPAAIKSAIMTTATTQDNTNGAIQDAFDNTLATPFAYGSGHVQPDLAMDPGLVYDITILDYLSFLCASGYSQNLISSLNSNKNFICSGSDRVTDLNYPSITLPNLGSDAENVTRTVTNVGPPGTYVANAKLPGFNTVVVPSSLTFKRLRPWFQVIVKARSVSQNGNYQFGELKWTNGKHIVRSPIVVRRTS* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2563 778 CDD PA_subtilisin_like 363 492 - -
Amo04g2563 778 Pfam Peptidase inhibitor I9 29 111 IPR010259 -
Amo04g2563 778 SUPERFAMILY Subtilisin-like 112 639 IPR036852 GO:0004252|GO:0006508
Amo04g2563 778 ProSiteProfiles Serine proteases, subtilase domain profile. 117 635 - -
Amo04g2563 778 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Amo04g2563 778 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Amo04g2563 778 PRINTS Subtilisin serine protease family (S8) signature 564 580 IPR015500 -
Amo04g2563 778 Pfam Fibronectin type-III domain 681 774 IPR041469 -
Amo04g2563 778 Gene3D Peptidase S8/S53 domain 142 648 IPR036852 GO:0004252|GO:0006508
Amo04g2563 778 Gene3D - 652 777 - -
Amo04g2563 778 CDD Peptidases_S8_3 110 601 IPR034197 -
Amo04g2563 778 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 113 IPR037045 -
Amo04g2563 778 Gene3D - 357 502 - -
Amo04g2563 778 Pfam Subtilase family 139 606 IPR000209 GO:0006508|GO:0008236
Amo04g2563 778 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 775 IPR045051 -
Amo04g2563 778 ProSitePatterns Serine proteases, subtilase family, serine active site. 565 575 IPR023828 -
Amo04g2563 778 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 17 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2563 Amo-Chr4 98628265 98633425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2563 29 775 Subtilisin-like Serine Gene Family AT2G04160 52.520 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2563 - - gmx:100803751 1142.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3624 14 140741456 140745510 Amo04g2563 04 98628265 98633425 hybridization