Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2557 ATGCTTCTCTCTTTACACCTSCCTTCACCATCCCCTTCTTCTTACCACACTCCTTCRAGAACCTTCCACAACAAACCCCACTACATCAAGTTCCGTACATCTTACCGCCAAAATCTCCGTTACCTCCAACACCTAACCGTTATCCCGCCCGACTCCCTCCCTGACTCCGACACTCTCCACCGCATATTCACCATCGTTAACCTCCTCAAATCCCACTCCCTCTCCGACTCCGACATCCCCCGCATCGCCGCTGCTGCACCCTCCCTCTTCTCCCCCTCCTCCGCTGCCTTCTCCCCCGATAACATATCCGCCGTGTTCCACTTCCTCGCCACCGACGTCGCCGCCTCCTCCGCCGAGTCCCGCGGCCTCGTCCTGCGCTGCCCTCACCTACTCCTCTCCCCGCACCCCGACCTCTGCCTCCGCCCAACGCTCTACTTCCTCCGCGACGAGATCGGGCTCTCCGGTCTGAACCGGCCGACGAACAGGAACGCGCATCTGCTGAACACGCGCGTGGAGGATCTGCGCGTGAGGGTGGAGTTTTTGACGGAGGAGGTTGGGTTTGAGTATGAGGAGGCGGTTAGGGCGTTGGTACGGGTACCGGCTATATTCGGTTACGGTTTGGAAAGTAATTTAAGGCCGAAATTTGAGTATTTGGTTGGTGAGATGGGTAGGGATGTTGAAGAACTGAAAAAGTTTCCACACTACTTTGGGTTTAGCTTGCGTAACAAAATTGTGCCAAGGCATTTACATTTGAAGCAAATGGGTGTTGTTGATGTTCCTTTGAATAAGATGCTTATGTGGCGTGATGAAAGATTCTATGCAAAATGGAAGTGA 834 0.5408 MLLSLHLPSPSPSSYHTPSRTFHNKPHYIKFRTSYRQNLRYLQHLTVIPPDSLPDSDTLHRIFTIVNLLKSHSLSDSDIPRIAAAAPSLFSPSSAAFSPDNISAVFHFLATDVAASSAESRGLVLRCPHLLLSPHPDLCLRPTLYFLRDEIGLSGLNRPTNRNAHLLNTRVEDLRVRVEFLTEEVGFEYEEAVRALVRVPAIFGYGLESNLRPKFEYLVGEMGRDVEELKKFPHYFGFSLRNKIVPRHLHLKQMGVVDVPLNKMLMWRDERFYAKWK* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2557 277 Pfam mTERF 99 272 IPR003690 GO:0003690|GO:0006355
Amo04g2557 277 PANTHER CGI-12 PROTEIN-RELATED 21 277 IPR003690 GO:0003690|GO:0006355
Amo04g2557 277 Coils Coil 164 184 - -
Amo04g2557 277 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 21 277 - -
Amo04g2557 277 Gene3D Transcription termination factor 3, mitochondrial 35 277 IPR038538 -
Amo04g2557 277 SMART mt_12 121 154 IPR003690 GO:0003690|GO:0006355
Amo04g2557 277 SMART mt_12 226 257 IPR003690 GO:0003690|GO:0006355
Amo04g2557 277 SMART mt_12 157 188 IPR003690 GO:0003690|GO:0006355
Amo04g2557 277 SMART mt_12 193 225 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2557 Amo-Chr4 98559011 98560036 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo04g2557 mTERF 6.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2557 K15032 - gmx:100812333 300.441