Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2550 ATGGATTCACCATCTCTATTCCTCTCCTCTTATCCACTCTTCAACAAAAACCACCCTAAAACCCAGAAATTCCCCACCTTCAAAGCCTCCTCTTTACTCTCAAACCATCACACACCACACTCTTCACCCCAATCCTCTACATCTTCTCCTCAACCCTGCAAGAATATATCATTTTCCACACTCCAAACCCATTCTCCTAGCTCACTTCAAAACCTTCTCTTTCCCCAAAATCTCTTATCAAAATCTTGCTTTTCATTAACTGTGATTGACCTCTTTGCTTCTCTTCCATCCCTTGCTGATGAAGCTGCAGCATCATCCCCTTTAGTTGAGTCAGATGCAGGCAAAATCAACTTGGAAGAAATTCTGGTCTCCATTGATAATTTCTTCAACAGATACCCATTTTTTGTTGCTGGGGTTACCTTCATTTGGCTTGTTGTTATACCAATTGCACAAGAGTATTTCAGGAAGTACAAGTTTGTGTCGGCCATTGATGCTTTCAGGAAACTCAGGGATGACCCTGATTCGCAGCTCTTGGATATCAGGGACAGAAAGAATGTGAAGTTTTTGGGGTCCCCCAACTTGAAACTGTTGAATAAGGAAGCGGTGAAGGTTGAGTTCACAGAGGGAAACGAAGATGGGTTTGTGAAGAAGGTATTGGGGAGATTCAAGGAACCTCCAAACACTGTTCTCTGTGTTTTGGACAGTTTTGACGGTAATTCATTGAAAGCTGCTGAGTTGCTATTCAAGAATGGCTTCAAAGAGGTCTATGCGATCAGAGGTGGAGTTAGAGGACAGCAAGGATGGATGTCTATACAGGATAGCCTTTTGCCGCCATCGGTGCACATTAAACGAAGGAAGAAGAAAAAAGCTTCACAAGAAGTCGGTGCAAATGGAAATGGAGCCATTCAGCAAAATGATAGTAATTATGAGAGCGCCTCAACCCCTGATATTCCTGCAGATGGAAATCAAGGAAAAGAGAATGGTCATGTGAAAAGGTCTGAAGAGTCTGTTCCAGAAGGGAAAATCAGTTCAGTAGTTTCTTCCTCTCCCTATCCCAATTACCCAGATTTGAAGCCACCATCATCACCAACTCCTTCAAAGCCACAATAG 1110 0.4288 MDSPSLFLSSYPLFNKNHPKTQKFPTFKASSLLSNHHTPHSSPQSSTSSPQPCKNISFSTLQTHSPSSLQNLLFPQNLLSKSCFSLTVIDLFASLPSLADEAAASSPLVESDAGKINLEEILVSIDNFFNRYPFFVAGVTFIWLVVIPIAQEYFRKYKFVSAIDAFRKLRDDPDSQLLDIRDRKNVKFLGSPNLKLLNKEAVKVEFTEGNEDGFVKKVLGRFKEPPNTVLCVLDSFDGNSLKAAELLFKNGFKEVYAIRGGVRGQQGWMSIQDSLLPPSVHIKRRKKKKASQEVGANGNGAIQQNDSNYESASTPDIPADGNQGKENGHVKRSEESVPEGKISSVVSSSPYPNYPDLKPPSSPTPSKPQ* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2550 369 MobiDBLite consensus disorder prediction 32 53 - -
Amo04g2550 369 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 140 264 IPR036873 -
Amo04g2550 369 MobiDBLite consensus disorder prediction 353 369 - -
Amo04g2550 369 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4A, CHLOROPLASTIC 3 369 - -
Amo04g2550 369 MobiDBLite consensus disorder prediction 296 320 - -
Amo04g2550 369 Gene3D - 156 281 IPR036873 -
Amo04g2550 369 MobiDBLite consensus disorder prediction 285 369 - -
Amo04g2550 369 ProSiteProfiles Rhodanese domain profile. 171 277 IPR001763 -
Amo04g2550 369 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 3 369 IPR044240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2550 Amo-Chr4 98403166 98407540 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2550 121 269 Sulfurtransferasese or Rhodanese AT4G01050 40.132 1.08e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2550 - - lang:109354968 452.595