Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2547 ATGATTAAAACAATCCTTCTCATCCCTTCTCAATTCATTATTTTCCTTCTCATCAACTCAGTACTACTCTCAGACACTGTAATGGCAGAACCAAGGGCAAGAACAATCCAAATAGCATGTGGTCATCAACTAGAGCACAATAGCACCATCTATGTTCCGAATTTCGTTGCAACCATGGAGAAAATCAGTGAACAGATGCGAAGTACCGGCTTTGGAACAACAGTTACAGGGACAGGACTTGATACTAACTATGGCCTAGCTCAGTGCTATGGAGATCTTTCATTGCTTGATTGTGTGCTATGTTATGCTGAGGCAAGGACGGTTCTTCCTCAGTGCTTCCCTTTCAATGGTGGCCGCATTTACCTCGATGGTTGCTTCATGAGGGCCGAGAATTATAGCTTCTTTGATGAGTATACAGGAGCAGGAGATAATGCAGTGTGTGGGAACAGAACAAGGAAGAACTCAAGTTTTCAAGAATCTGCAAAGCAAGCAATTCTAACAGCAGTTCAAGATGCACTTAGCAATAAAGGATATGCTAGAGGGAAGGTCGCCGTGGCCGGAACAGTTAATGAGTCTGCTTATGTGCTGGCTGATTGTTGGAGGACTTTGAACACAAGCTCTTGTAAAGCATGTCTTCAGAATGCATCAGCTTCTCTGTTGGGATGCTTGCCTTGGGAAGAAGGCCGCGCGCTTAACACCGGTAATGTAATAGTTCTGGTGGTTGCAGTGGTTAGTTCATTGATTGTTTTTGTGGTTGGAATAGCTATTGGGATATATATCTTGAAACTTAGATACATTCAAAAGAAAAGAAGAGGTTCATATGATACAGAAAAGTTAGCAAAGTCCCTTCGCCGCAGTAGCCTGAATTTCAAGTACACTTCACTGGAAAGGGCTACTGGATCCTTTGATGAGACTAACAAGTTAGGACAAGGAGGATTTGGAACAGTTTACAAAGGAGTTCTACCTGATGGAAGAGAGATTGCTATCAAGAGGCTATATTTCAATAACAAACATAGAGCAGGAGATTTCTACAATGAAGTGAACATAATCAGTAGCGTGGAACACAAGAATCTAGTCCGACTGTTAGGATGCAGTTGTTCAGGACCCGAAAGCCTGCTTGTGTATGAATATCTGCCCAACAGAAGTCTCGATCGCTTCATTTTTGACAAGAATAAGGGAAGAGAACTGAACTGGGAGAAGAGATACGAAATCATCGTTGGGACAGCTGAAGGATTAGCATACCTACATGAGAATTCTAAAACCAAAATAATTCACAGAGATATAAAAGCCAGCAACATCCTCTTGGATGCAAAGCTTCGTGCTAAAATCGCAGATTTTGGCTTGGCTAGATCCTTTCAAGAAGATAAGAGCCATATAAGTACAGCTATTGCAGGAACTTTGGGTTATATGGCTCCAGAGTACATAGCTCATGGTCAGTTAACAGAAAAGGCAGATGTGTATAGTTTTGGAGTGCTACTGCTAGAGATAGTTACCGGGAGACAGAACAACAGGAGCAAAGCAGCTGAATATTCAGACAGCCTAATTACAGTGGCATGGAAACACTTTCAGTCAGGGACAGCTGAACAATTATTTGATCCAAATCTTCAGTTGCATGAAGACTACAACAACAGCAGTGTTAAGAATGAGATCTTAAGAGTGGTTCAAATAGGACTTCTATGCACCCAAGAGAACCATTTGTTGCGGCCAACTATGTCAAAAGTGCTGCAGATGCTAACAAAGAAGGAGGAGCAACTTGTTGCTCCTTCTAATCCACCTTTCCTAGATGAGAATACCATGGAATTCTGTGACATAAGTGGTGACCCATTTTTCCCTCTCGTTGCAGATGACTCAGTCGCTACCATGTCCCATAGCTCTTTTCATCCCAGGTGA 1890 0.4228 MIKTILLIPSQFIIFLLINSVLLSDTVMAEPRARTIQIACGHQLEHNSTIYVPNFVATMEKISEQMRSTGFGTTVTGTGLDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPFNGGRIYLDGCFMRAENYSFFDEYTGAGDNAVCGNRTRKNSSFQESAKQAILTAVQDALSNKGYARGKVAVAGTVNESAYVLADCWRTLNTSSCKACLQNASASLLGCLPWEEGRALNTGNVIVLVVAVVSSLIVFVVGIAIGIYILKLRYIQKKRRGSYDTEKLAKSLRRSSLNFKYTSLERATGSFDETNKLGQGGFGTVYKGVLPDGREIAIKRLYFNNKHRAGDFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEYLPNRSLDRFIFDKNKGRELNWEKRYEIIVGTAEGLAYLHENSKTKIIHRDIKASNILLDAKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYIAHGQLTEKADVYSFGVLLLEIVTGRQNNRSKAAEYSDSLITVAWKHFQSGTAEQLFDPNLQLHEDYNNSSVKNEILRVVQIGLLCTQENHLLRPTMSKVLQMLTKKEEQLVAPSNPPFLDENTMEFCDISGDPFFPLVADDSVATMSHSSFHPR* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2547 629 SUPERFAMILY Protein kinase-like (PK-like) 286 600 IPR011009 -
Amo04g2547 629 Gene3D Transferase(Phosphotransferase) domain 1 378 590 - -
Amo04g2547 629 ProSiteProfiles Protein kinase domain profile. 302 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2547 629 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Amo04g2547 629 Pfam Protein tyrosine and serine/threonine kinase 305 578 IPR001245 GO:0004672|GO:0006468
Amo04g2547 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Amo04g2547 629 ProSiteProfiles Gnk2-homologous domain profile. 33 134 IPR002902 -
Amo04g2547 629 Gene3D - 33 134 IPR038408 -
Amo04g2547 629 Gene3D - 144 238 IPR038408 -
Amo04g2547 629 SMART serkin_6 302 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2547 629 ProSiteProfiles Gnk2-homologous domain profile. 139 246 IPR002902 -
Amo04g2547 629 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 11 608 - -
Amo04g2547 629 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 11 608 - -
Amo04g2547 629 Pfam Salt stress response/antifungal 150 222 IPR002902 -
Amo04g2547 629 Pfam Salt stress response/antifungal 49 132 IPR002902 -
Amo04g2547 629 Gene3D Phosphorylase Kinase; domain 1 264 377 - -
Amo04g2547 629 CDD STKc_IRAK 308 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2547 Amo-Chr4 98369805 98372451 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2547 27 629 Receptor kinase-like Gene Family AT1G70520 65.869 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo04g2547 PK_Tyr_Ser-Thr 3.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2547 - - gmx:100305420 1006.51