Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2524 ATGCAGAACCTTTTGTTCTTGATGTTGTTCTTCTTCTTCTTCTGCAATGCTAGTTCTAACAACAGAAGCAGAAGAATCTTGCATGAACCCTTTGTACCATTGGAAGCACACCCACCCACTGAGCCACCAAAGCCATCACCTTCTTCTAACACCACTGCAATTCAAAAGCAAAACCCAAAGCACCCTTCCTCCACTGCAACAGCCACCGCCTCCACCTCTACCACTACCACCACCACCACCACAACCACAACTACACCAAATGATTCACCGTTTTTCCCAAACTACCCTTCACAGCCACCTCCACCGCCACAATCATTCGCAGGCTTTGCTTCCTTCCCAGCTAACATTTCCTCACTCATTCTTCCACATTCTCCAACTCCTACTCACTCCAATTCCAAGCTTCTCCCCGTTGCTCTCTCCGCCGTCGCATGCGCGGTCGTCGCCGTCGCCGTCTCTGCATTTTTCTATCTTCGACGCCGTCGCCGGAACCGTGGCCCCGGAGAGAACAAGGATGTCAGTCCCGACGGTGGTCGCCGGCGGGAAACCGCCGCGAAGCACCGGCAGTCTCCTACTGCCGCTGGGTCCGAGTTTCTCTACCTCGGCACCGTCGTCAATTCGCGCCGGATCGAAGGAGGCGGTAGCGGCGGCGGAGATGTCAGAGATAATAGAGGCTCCGTGAGTCGGAAATTGGAGTCGCCGGAGCTCCGGCCACTTCCGCCGCTAGTAAGGCAGATTTCGGCGCCGCCGGTGGTGACGGCAGCGCAAGAAGAGGCGGAGAATGAGGAGGAAGAGGAATCGGAGGTGTTTTACTCGCCGAGAGGTTCGTCGTTAGGAGGGCAAGAGAGCTCCGGTGGCACCGGATCGGGTTCCCGGCGAGCGTTGTCTGCAATCGCCGGGGATAGTTTCGAGGAATTGAGCTCGTGTTCGGTTTCTTCCTCGAATTCTGGGTCGCCGGAGCGGTGTCACTCAATCAGCATCTCCCCGCCGGCACATCTTTCGCCGTCGTCGTCGCCGCCACCACAGCCACAGCAACAAATCGTGACATCGGTTTTGTCACCTACATTATCACCAATGCACAACCAACACATTAATTCTTCATGTTCTTATTCTTCTTCGCTTTGTTCTTCAGCATGTGCAACACCAGAGAGAGGTTTTGTTGAAGAAGAAGAAGAAGATACTCATGGTAATGCTGTTACTGAATCTCCTTTACTTTCGCCACTTTCATTGCCACCTAATAGAGCTCCGGAGGAGAAAACCCTAATTGCAAATTTGGACTCATCTTCTTCATCACCACAAAAGAAGGTTTCGGAAACATACGAAGCTGCATCACCAAGGAATTCTAATGTCTCCAATGGAAGTAGAAAGTCTTCCTCATCATCAGCATCAGCAAGGGTTTCTAATGGTTCCAATGGAAGTAGAAAATCTTTGTCACGATCAGCATCGTTAGACAGGGTTTTGAAGACTAGTGAAGTTGCATCATTGGCCTCGTCTAGGATTTCTAGTTCTTCCAATGCAAGCAGAAAATCTAAATCATCATCATCACAAGAGAGGATCTCGGAGACGAATGAAGTTGAAACTGCAACTGCAATTGCATCTGCATTACCATTGACATCACCTCCAAGGCTATCTAATGTTTCTTCCAATGGAAGTGCAAAGTTTATGGCATCATCACCATTGTCTTCGGCTTTCTCTCTGCCTTCTTCTCCGGAGAAGGCAAGGAGTCATAACGGTTTTGATCAGTCTCCGAGAATGTCCAGTGTCTCAGACCAGTTTAGGCAACCGGGTTTGTCTTCAGTGCCATTGTCACCATCTCTACTTTCATCACCAGAGACAGAAAGAGGGTTTAATTTCAGTAGCAGTTTCAATTCAACTGAATCAGCATCAATTGCTAATGGTGCTTCACAGAGGAAGCATTGGGAGATACCTGCATTGTCAACAACAACAAAAAATCCATTTGGTCGATCAGGATCTATTGGTAGTGTTTTGGATCAAATTGTAGCTGTTCCGGTTACTCATCCACCACCTGTGCCTCCTCAGAGGAAACAATGGGCGATACCCGGTATCACAACACCACTTGCTCCGCCTCCTCCGCCACCTCCTCCTCCACCTGCAGCTACACTGCAGCAGCGGCAGCGGAAGCAGTGGGAGGTGCCATCTCCCACAACACCTGTTGGTCAATCTGTATCGAGGCCACCAGAGTTGAAACCTCCTTCCAGGCCTTTTGTGTTGCAGAACACAACATTGGTTTCCCCTGTTGATCTGACCCCAAGTTCTCAGGGTTCGGCTGAAGCTGAAGAGGCTGCGAAGCCAAAGTTGAAGCCCTTGCACTGGGACAAAGTAAGGTCAAGTTCTGATCGTGAAATGGTGTGGGATCAGTTGAAGTCGAGCTCTTTCAAATTGAATGAGGAAATGATTGAAACATTGTTTGTAGCAAACATGCCAAACTCGAAACCAATGGATTCTACTTCATGCACAGTTCTTCCCCATTCAAGCCAGGAGGAGAAAGTACTTGATCCTAAAAAGTCCCAAAACATTGCAATCTTGCTGAGAGCACTTAATGTCACTATAGAAGAAGTGTGTGAAGCACTTTTAGAAGGTAGTGCTGATACACTTGGAGCAGAACTACTTGAAAGCTTGTTAAAAATGGCTCCGATTAAGGAAGAAGAGCGTAAATTGAAGGAATACAATGATGACTCACCAACCAAGCTTGGCCCAGCTGAGAAATTCTTGAAGGCATTGCTTGATGTACCTTTTGCGTTTAAAAGGGTGGAAGCAATGCTTTACATAGTCAATTTTGACTCTGAAGTCGAGTATCTTAAGAAATCCTTTCAAGGTCTAGAGGCTGCCTGTGAAGAGTTGCGAAGTAGTAGAATGTTCTTGAAGCTTCTAGAGGCTGTGCTTAAAACTGGGAACCGCATGAATGTGGGGACAGACCGTGGTGATGCGCAGGCCTTTAAACTTGACACACTTCTCAAGCTGGCCGATGTCAAAGGTGCAGATGGAAAAACGACGCTACTGCACTTTGTTGTCCAAGAGATCATAAGAACTGAAGGTGCTCGGCTCTCCAGTACTAACCAAACCCCAAACTCTTCCTTGGCCGAAGATGTTGCGTTCCGGAGGCTTGGCCTGCAAGTAGTATCTAGTCTGAGTTCAGAGCTAGCAAGTGTCAAGAAGGCTGCTACCATGGATTCTGAGGTTCTCAGTAATGATGCGGCCAAGCTCTCCAAAGGGATTGCAAACATTGCAGAGGTTGTACAATTGAACGAAAAAGCTGGGTCAAATGAGAAGTTTACAGAATCAATGAACAAGTTCATTAGAATGGCTGAGGAAGAAATTCTGAAGATTCAAGCCCAAGAAAGTGTTGCTATGACCCTTGTGAAGGAAATCACAGAGTATTTTCATGGTGACTTGGCAAAGGAAGAAGCTCATCCATTCAGAATCTTCATGGTTGTAAGAGACTTTCTTGCAGTTCTTGACCGTGTATGCAGAGAAGTTGGTATGATAAATGAGAGAACCATGGTTAGTTCAGCACATAGATTCCCTGTACCAGTTAACCCAATGCTTCCACAACCAGTTAACCCAATGCTTTCACAACCCCTTCCTGGATTGCATGGAAGGAGACAGAATAGTGAATCTTCAGATGATGATACTCCATCATCTTAG 3663 0.4767 MQNLLFLMLFFFFFCNASSNNRSRRILHEPFVPLEAHPPTEPPKPSPSSNTTAIQKQNPKHPSSTATATASTSTTTTTTTTTTTTPNDSPFFPNYPSQPPPPPQSFAGFASFPANISSLILPHSPTPTHSNSKLLPVALSAVACAVVAVAVSAFFYLRRRRRNRGPGENKDVSPDGGRRRETAAKHRQSPTAAGSEFLYLGTVVNSRRIEGGGSGGGDVRDNRGSVSRKLESPELRPLPPLVRQISAPPVVTAAQEEAENEEEEESEVFYSPRGSSLGGQESSGGTGSGSRRALSAIAGDSFEELSSCSVSSSNSGSPERCHSISISPPAHLSPSSSPPPQPQQQIVTSVLSPTLSPMHNQHINSSCSYSSSLCSSACATPERGFVEEEEEDTHGNAVTESPLLSPLSLPPNRAPEEKTLIANLDSSSSSPQKKVSETYEAASPRNSNVSNGSRKSSSSSASARVSNGSNGSRKSLSRSASLDRVLKTSEVASLASSRISSSSNASRKSKSSSSQERISETNEVETATAIASALPLTSPPRLSNVSSNGSAKFMASSPLSSAFSLPSSPEKARSHNGFDQSPRMSSVSDQFRQPGLSSVPLSPSLLSSPETERGFNFSSSFNSTESASIANGASQRKHWEIPALSTTTKNPFGRSGSIGSVLDQIVAVPVTHPPPVPPQRKQWAIPGITTPLAPPPPPPPPPPAATLQQRQRKQWEVPSPTTPVGQSVSRPPELKPPSRPFVLQNTTLVSPVDLTPSSQGSAEAEEAAKPKLKPLHWDKVRSSSDREMVWDQLKSSSFKLNEEMIETLFVANMPNSKPMDSTSCTVLPHSSQEEKVLDPKKSQNIAILLRALNVTIEEVCEALLEGSADTLGAELLESLLKMAPIKEEERKLKEYNDDSPTKLGPAEKFLKALLDVPFAFKRVEAMLYIVNFDSEVEYLKKSFQGLEAACEELRSSRMFLKLLEAVLKTGNRMNVGTDRGDAQAFKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGARLSSTNQTPNSSLAEDVAFRRLGLQVVSSLSSELASVKKAATMDSEVLSNDAAKLSKGIANIAEVVQLNEKAGSNEKFTESMNKFIRMAEEEILKIQAQESVAMTLVKEITEYFHGDLAKEEAHPFRIFMVVRDFLAVLDRVCREVGMINERTMVSSAHRFPVPVNPMLPQPVNPMLSQPLPGLHGRRQNSESSDDDTPSS* 1221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2524 1220 MobiDBLite consensus disorder prediction 342 378 - -
Amo04g2524 1220 MobiDBLite consensus disorder prediction 689 706 - -
Amo04g2524 1220 SUPERFAMILY Formin homology 2 domain (FH2 domain) 694 1170 - -
Amo04g2524 1220 MobiDBLite consensus disorder prediction 672 770 - -
Amo04g2524 1220 MobiDBLite consensus disorder prediction 707 728 - -
Amo04g2524 1220 MobiDBLite consensus disorder prediction 163 186 - -
Amo04g2524 1220 MobiDBLite consensus disorder prediction 163 196 - -
Amo04g2524 1220 MobiDBLite consensus disorder prediction 92 106 - -
Amo04g2524 1220 MobiDBLite consensus disorder prediction 34 106 - -
Amo04g2524 1220 SMART it6_source 762 1173 IPR015425 -
Amo04g2524 1220 MobiDBLite consensus disorder prediction 209 623 - -
Amo04g2524 1220 Gene3D Formin, FH2 domain 759 1167 IPR042201 -
Amo04g2524 1220 PANTHER FORMIN-RELATED 5 1219 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Amo04g2524 1220 MobiDBLite consensus disorder prediction 273 290 - -
Amo04g2524 1220 MobiDBLite consensus disorder prediction 302 322 - -
Amo04g2524 1220 MobiDBLite consensus disorder prediction 740 762 - -
Amo04g2524 1220 ProSiteProfiles Formin homology-2 (FH2) domain profile. 762 1184 IPR015425 -
Amo04g2524 1220 Pfam Formin Homology 2 Domain 766 1158 IPR015425 -
Amo04g2524 1220 PANTHER FORMIN-LIKE PROTEIN 1 5 1219 - -
Amo04g2524 1220 MobiDBLite consensus disorder prediction 421 623 - -
Amo04g2524 1220 MobiDBLite consensus disorder prediction 47 91 - -
Amo04g2524 1220 MobiDBLite consensus disorder prediction 1190 1220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2524 Amo-Chr4 98000650 98005431 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2524 24 278 FH2 protein (formin) Gene Family AT3G25500 36.462 2.99e-20 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2524 - - ahf:112744322 1881.69