Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2507 ATGAACCTCTTTCTCCTCCAAGTGCCCATGTTCTCCTTGTTCCTCCGCCGCCATTTCTTCTCCACCAAGCTCCCTACCCTCTCCAAGGTCCCCACGCGTCACAGAACCTTCGCTCTCCGTGAAGCCCAGAACGCCCTCACTGACTACCTTCATGCCACCAGGTGCTTGCCTTTTACCTATGCAGAGCACATTGGCAACAAAGCCCTTTGTTCCCTCATGAGTCTCATTGCAAAGGTAGATTTTTCAGCCCCTACTTTCTCTAAAAGCTTTCAGAAGTTCCTTAGGTACCACCCTATTAATGAATTCGAGGTCTTCTTCGAGAGCATAGGGATAGAGTACAGTATGGTGTCTGAGTTGTTGCCTCGTGACAAGGTGTTCTTTTCTGAAGATGTGATCCTCTTTGATGCTGCTTGCACTCTTTGTGATTTCGGGTTTCCCTGGGAGAAGTTGGGGTTGTTGTATATGGCAGAAAGTTCAATATTTGGCATGAATGCTGAACAGTTGAATAGAAGGCTTTGTGGATTTAAAGGGTTTGGTTTTGGTAGCGTTGAGGTTATTGGTATATGTTTGGCTTTCCCTTTTGTTTTACTTGAGGAAGGCCAAGTGAGAGCTGGAAGAATTGAGCGACTCTTAAGTGATCTGAAATTGATATTTTTGGATTTTGGGTTGGGAAGGTTTGTTGAGGGAGATGTGGATTCTTGGCATGATATGTGTAGAAAATTAAGGGTGTTTTATGATTTAGATAGTCGGAAAGGTGTGTTAGGCGAACTAATCGGAAGGCATAAAAGTATATTTATCGATTATAGAGAAGAAGAGTTAGTTAATAAAGTGGATTATTTCTGTAGATTTGGTGTGAAGAAGGAGGAAGTGGCTCAATTGATTTTACAATGCCCGGAAATATTGAAAATGGATCTGGAGAAGCCGGTATTCAATGTAATGAAGCTGTTGACACACTTTGGCCTTAGCAATGAAGATATAGAGGAAGTAAGTCGGAGTTATGGTCATGTTATGGGAACAAATAAAATGGCTAATCTTCCTAATGTAATGAAGGCTTTAGGCTTACAAGAGTGGTTCTTCAAGAAAATCAAGGATGGAAATCATATGTTGTTAGCAGATTATATCGCAAGATATCCTAAAGAAGAACAGGATCTAGATTATCAAGAAGGTTTAAGGATAATTAGAAGTTTAAAAACACGGGTTCATAATATCGGTAAATTAAATTTCTTGCTTGGCTTGGGCTTTGGAGAAAATACTTTGTCCATAAACCTTTTGAATCATCTTCATGGCACTAGTACTGAGCTGCATGAAAGATTCGATTGCCTCCTACGTTCAAAGATTGAATTCTCCCGGCTCTGTATGATGGTAAGAACAACCCCAAGGATTCTTAACCAAAATTCGGAAACCATTGAGCAAAAGGTGAATTTCTTCCACCAGGAAATGGGAACTACTTTAAATCATGTGGAAACTTTTCCTGCAATATTGTATTATCACTTAGAGGACCGGATTATACCTAGGTACAGATTCCATAAGTGGCTTTCAGGAAAAGGTCTGAGTTGTAAGAAATATTCTATTCGAACTCGTGTCTTCAAAATTCATCCAGCTGCTCCAAAACATTGGTTTGAGCGATTCCGGCATGGTAAGTTGCCAGTGTAA 1653 0.4053 MNLFLLQVPMFSLFLRRHFFSTKLPTLSKVPTRHRTFALREAQNALTDYLHATRCLPFTYAEHIGNKALCSLMSLIAKVDFSAPTFSKSFQKFLRYHPINEFEVFFESIGIEYSMVSELLPRDKVFFSEDVILFDAACTLCDFGFPWEKLGLLYMAESSIFGMNAEQLNRRLCGFKGFGFGSVEVIGICLAFPFVLLEEGQVRAGRIERLLSDLKLIFLDFGLGRFVEGDVDSWHDMCRKLRVFYDLDSRKGVLGELIGRHKSIFIDYREEELVNKVDYFCRFGVKKEEVAQLILQCPEILKMDLEKPVFNVMKLLTHFGLSNEDIEEVSRSYGHVMGTNKMANLPNVMKALGLQEWFFKKIKDGNHMLLADYIARYPKEEQDLDYQEGLRIIRSLKTRVHNIGKLNFLLGLGFGENTLSINLLNHLHGTSTELHERFDCLLRSKIEFSRLCMMVRTTPRILNQNSETIEQKVNFFHQEMGTTLNHVETFPAILYYHLEDRIIPRYRFHKWLSGKGLSCKKYSIRTRVFKIHPAAPKHWFERFRHGKLPV* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2507 550 Pfam mTERF 434 523 IPR003690 GO:0003690|GO:0006355
Amo04g2507 550 Pfam mTERF 240 352 IPR003690 GO:0003690|GO:0006355
Amo04g2507 550 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 23 543 - -
Amo04g2507 550 Gene3D Transcription termination factor 3, mitochondrial 311 531 IPR038538 -
Amo04g2507 550 PANTHER CGI-12 PROTEIN-RELATED 23 543 IPR003690 GO:0003690|GO:0006355
Amo04g2507 550 SMART mt_12 484 518 IPR003690 GO:0003690|GO:0006355
Amo04g2507 550 SMART mt_12 151 181 IPR003690 GO:0003690|GO:0006355
Amo04g2507 550 SMART mt_12 291 322 IPR003690 GO:0003690|GO:0006355
Amo04g2507 550 SMART mt_12 452 483 IPR003690 GO:0003690|GO:0006355
Amo04g2507 550 SMART mt_12 256 286 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2507 Amo-Chr4 97720268 97722556 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo04g2507 mTERF 1.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2507 - - adu:107486036 1081.63