Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2437 ATGTGTGGGATATTCGCGTATCTCAATTACAACGTGAATAGGGAGAGGAGGTACATATTGCAGGTCCTATTCAATGGTCTTCGCCGTTTGGAGTATCGCGGTTACGATTCCGCCGGAATCGCCATTGACTCTGATCCAAAACCCGCGCCGCAAGCCTCCTCCGCTTCCGCTTCCGATTCCGATCCTCCTCCTATCGTCTTTCGCCAGGAAGGCAACATCGAGTCCCTCGTCAAATCTGTCTACCAAGATGTGGCTAAATTGGAACTAAACTTGGAGGCATCATTTTCCACTCATGCTGGATTAGCACACACCCGGTGGGCCACTCATGGAGAGCCTGCTCCCAGAAACAGTCATCCACAGAGCTCAGGTCCCGGAAATGAATTCTTAGTTGTTCATAATGGAGTTATCACTAACTACGAGGTTTTGAAAGAAACACTCATCCGACATGGATTCATCTTTGAATCTGACACTGACACAGAAGTCATTCCAAAGCTAGCAAAGTATGTTTATGATAAAGCAAATGAAGCAGCAGATGGCCAGGTTGTTACCTTTAGTCAAGTTGTTCTGGAAGTTATGAGGCATCTTGAAGGAGCCTATGCCCTTATTTTCAAAAGTTCGCATTACCCTAATGAATTGATTGCGTGCAAGCGTGGTAGCCCACTGCTCCTAGGTGTTAAAGAAATGACAGAAAATAAGGAGAATGGTTCTGCATTTGATGACAACAAAACCCTATCAAAAGATGGAGGCCCCAAGGAATTGTTTTTGTCTAGTGACGCCAATGCTGTGATTGAGCATACAAAAAAAGTGCTAGTTATTGAAGATGGTGAAGTAGTTCATCTCAAGGAAGGTGGGGTTTATATTTTGAAGTTTGAAAATGACAAGGGAGAACGTGTTGCTTCTCCTACAAAAATTGCTTCAGTGCGCCGTGCGTTATCTGTCCTTGAGATGGAGGTTCAGCAGATAAACAAAGGACATTATGAACATTATATGCAGAAGGAAATTAATGAGCAACCAGAATCTCTAACAACCACTATGAGGGGGAGGCTTATACTTAGAGGATCTAGCAAATCCAAGTCTGTTTTGCTGGGTGGACTGAAGGATCACCTCAAAACAATTAGGCGGAGTAGAAGGATACTTTTCATTGGTTGTGGTACAAGTTATAATGCTGCTTTGGCAGCAAGGCCTATCTTAGAAGAACTTACTGGTATTCCTGTCACTATGGAGATTGCTAGTGATCTACTGGATCGGCAGGGCCCAATATACAGAGAAGATACAGCTGTTTTTGTTAGTCAGTCCGGTGAAACTCATGACACGCTAGTTGCACTGCAATATGCTTTAGACAATGGTGCATTATGTGTTGGAATAACAAACACTGTGGGTAGTGCAATTGCAAGGAATACTCATTGCGGTGTTCATATAAATGCTGGTGCTGAGATAGGTGTAGCAAGTACCAAGGCATACACAAGTCAAATAGTGGTGATGGCCATGTTGGCTCTTGCAATAGGAGGTGATACACTCTCCAATCAAGCTAGAAGAGAAGCCATAATAGATGGTCTATTTGACTTGCCAAATAAAGTCAGAGAGGTGCTGAAGCTTGATCAGGAAATGAAAGATCTCGCAAAGCTATTGAGTGCCGAGCAGTCGCTTCTCGTCTTTGGGAGAGGATACAACTACGCTACTGCTCTGGAGGGAGCTTTGAAAGTAAAGGAAGTGGCACTTACGCACAGTGAGGGAATACTTGCTGGTGAAATGAAGCATGGTCCTTTAGCATTAGTGGATGAAACTCTCCCAATTGTCGTTATAGCCACGCGCGATGCTTGCTTCAGCAAGCAGCAGTCTGTTATTCAGCAACTTATTGCCCGCAGAGGCCGCCTTGTAGTTATGTGTTCAAAAGGGGATGCTTCTTCTGTAAGCCCTAGTGAAACTGTTAGGGTAATTGAAGTTCCACAAGTTGTGGACTGTCTTCAACCTGTTATTAATGTAGTTCCCTTACAGTTACTGGCGTATCATCTCACTGTACTGAGGGGATTCAACGTTGACCAGCCACGTAATCTTGCCAAGAGTGTCACTACACAGTAG 2079 0.4425 MCGIFAYLNYNVNRERRYILQVLFNGLRRLEYRGYDSAGIAIDSDPKPAPQASSASASDSDPPPIVFRQEGNIESLVKSVYQDVAKLELNLEASFSTHAGLAHTRWATHGEPAPRNSHPQSSGPGNEFLVVHNGVITNYEVLKETLIRHGFIFESDTDTEVIPKLAKYVYDKANEAADGQVVTFSQVVLEVMRHLEGAYALIFKSSHYPNELIACKRGSPLLLGVKEMTENKENGSAFDDNKTLSKDGGPKELFLSSDANAVIEHTKKVLVIEDGEVVHLKEGGVYILKFENDKGERVASPTKIASVRRALSVLEMEVQQINKGHYEHYMQKEINEQPESLTTTMRGRLILRGSSKSKSVLLGGLKDHLKTIRRSRRILFIGCGTSYNAALAARPILEELTGIPVTMEIASDLLDRQGPIYREDTAVFVSQSGETHDTLVALQYALDNGALCVGITNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTLSNQARREAIIDGLFDLPNKVREVLKLDQEMKDLAKLLSAEQSLLVFGRGYNYATALEGALKVKEVALTHSEGILAGEMKHGPLALVDETLPIVVIATRDACFSKQQSVIQQLIARRGRLVVMCSKGDASSVSPSETVRVIEVPQVVDCLQPVINVVPLQLLAYHLTVLRGFNVDQPRNLAKSVTTQ* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2437 692 Pfam SIS domain 543 674 IPR001347 GO:0097367|GO:1901135
Amo04g2437 692 Pfam SIS domain 372 499 IPR001347 GO:0097367|GO:1901135
Amo04g2437 692 PANTHER GLUTAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING] 2-LIKE 1 692 - -
Amo04g2437 692 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 328 IPR029055 -
Amo04g2437 692 Gene3D - 528 677 - -
Amo04g2437 692 CDD GFAT 2 280 - -
Amo04g2437 692 ProSiteProfiles SIS domain profile. 368 507 IPR001347 GO:0097367|GO:1901135
Amo04g2437 692 ProSiteProfiles SIS domain profile. 539 682 IPR001347 GO:0097367|GO:1901135
Amo04g2437 692 SUPERFAMILY SIS domain 323 691 IPR046348 GO:0097367|GO:1901135
Amo04g2437 692 Pfam Glutamine amidotransferase domain 95 206 - -
Amo04g2437 692 Gene3D - 329 691 - -
Amo04g2437 692 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 283 IPR017932 -
Amo04g2437 692 MobiDBLite consensus disorder prediction 41 64 - -
Amo04g2437 692 CDD SIS_GlmS_GlmD_2 534 690 IPR035490 -
Amo04g2437 692 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 692 - -
Amo04g2437 692 CDD SIS_GlmS_GlmD_1 377 502 IPR035466 -
Amo04g2437 692 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 289 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2437 Amo-Chr4 96887696 96893392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2437 100 247 PRT Gene Family AT4G38880 27.632 4.89e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2437 K00820 - gmx:100792835 1181.01