Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2402 ATGGAAGATGACAACCACCGTAACAACATAGATAATAAGAACATGAACACAACCACCACCAACAACAACAACAACAACGTTAGTAGTAACAATTGTAGTGATTCAAAAAACATGGATTCTGATTCAAAAGGTGGAATCTTTCCGGCTTTTCCAGTTAAGAGAAGCATAGCGGAGAGAAGGGGTTTCAATTCCAATGCAGCAAGGATCAACACAGCTAGGTTCAGAACAAACACAATCACAACAAGCCCTTTAGCTTCTCCATCTCCGGCTTCTTGTTCTGCATCACCATGCATCACTATACCTCCTGGCATTAGTCCCACTGCATTGCTTGATTCTCCCATCATGCTCCCCAATTCTCAGGCTATGCCTTCTCCAACTACTGGCTCATTTCATTGGCTAAGTTCTTTACCACTTGATCAAGGGAATCTCAATGATGCTCCTGATTCTTCCCTCAAGTTTAAGAACAATGCCACCCTTGCCGATCCTAATCCTTTGCCTCCTTACTCTGCGTCTCTGAATCAGGTTTCTAGTAATTGGCACATGGTAAAGGGAGGAAATACAGACTGTCAATCAATTGTTCCAGTTCTGCCGCCGATAGATTTTTCGTTCCCGGAAGAATTTTCAAAAGGACAAAACGCAAAAAGTATTGAGTCCCGTTCATTCAATGATGTGAAAATGGTAAATTGTTCACTTGTTAATGTTAATAAAGTTGAGATGATGCAAATATCACATTCCGATGAAGCTGGTGATGAAAGCACTCTGCCGAAAAATGTTACTCTTGGTGGGGATATCGGACGGCAACCTGTTATGGAGAAAGACCAGAAAGAGACCTTGCTTGCAACCGGAGTGGTAAGGACCTCGGAGGATGGTTATAATTGGAGAAAGTATGGTCAGAAACAAGTAAAAGGTAGCGAGTATCCTAGGAGTTATTATAAATGTACTCAACCTAATTGTCAGGTCAAGAAGAAGGTGGAAAGATCCCATGATGGCCAAATAACAGAAATTATTTATAAGGGTACTCATAACCATTCAAAACCACACCTTGGTCGTCGAGCGTCAGGGCTTTCCACTGATGAGATGTCAGACATGGGTGAAGCTGGTGAAAACTATGCTAAACTTGAAGGTTCAGGTTGGAAAAATGTTCAACCGGGAGCAAAAGACACAAAGCACGGTTTGGATTGGAAGGCTGACGGTCTGGAAAGAACATCCTCAACTTCTGTCGTGACTGAACTTTCGGATCCTATGTCGACTAACAAAGGTAAACCTTTGTGTGCCTTTGAAGCGGAAGACACTCCCGAACATTCTTCCACACTTGCCAGTAATGATGGTGATGAAGATGGAACCACTCAAGCACTAGCACCAGCTGAGGATGATGCTGAAGATGATGAATCAGATTCCAAAAGAAGGAAAAAAGAGAACTACTTGGTTGAATCAACTTTGCCTTCTAGGGCTGTTCGTGAGCCAAGAGTGGTGGTCCAAATTGAGACYGAGATTGACATACTCGATGATGGTTATCGATGGCGCAAGTATGGACAAAAGGTTGTCAAAGGAAACCCAAACCCAAGGAGCTACTATAAATGCACAAGTGCCGGATGTCCCGTGAGGAAACACGTCGAAAGGGCTTCGCACAATACGAAATATGTAATCACTACATATGAGGGCAAACATAATCATGAAGTTCCGACGGCCAGAACCAACAATCACGTAAGCTCGAATGATGGTGGTTTACCTCCCAGTGGTCCTAATGGCCAATCAGCTCTTGCATTACCTGGCAGTGCTGTTATCCCGAAGTCTGAAAATCATCAAACTCTTACGTCTCATTTTGATCGAAAACCTGAATTCGGCAGCGACTTTCTTCGGCCGAGTTTGGTCGGAGCATTCAGCAACAATTTGAAGTTCGGTTCTTCCCCCATGTGCCAGATGAAGTATCCTTCCTTGAGTAGCACCATGCCTTACAGTTCGTTTGTACTGAATCCCGATCGCTGCACTGCCCCACAAGCTGGATCTATTCCCTCAGTGTATCCCGACTTTCCAATGCCGCTTCCCTTGAATCTTCCCTCATCCGGAACCTTCTCTCTTGCTGGACTAAACTTCAACTGTGCAAAGCCAATGAATCCAGTGCAGCCTTTCCTTTCAGGGCAACAAGTGAAGGATATTGATACTGGGTTCTTGAGGCCTAAACAGGAACAGAAGGATGATGCAATATATGGAACATGCTTACCTCCAGTTGATCATGGAAATTCTTCATCAGCAGCACCATCATCCATTTACCAGCAAGTCATGCAAAATTTCCCTTCATAA 2301 0.4385 MEDDNHRNNIDNKNMNTTTTNNNNNNVSSNNCSDSKNMDSDSKGGIFPAFPVKRSIAERRGFNSNAARINTARFRTNTITTSPLASPSPASCSASPCITIPPGISPTALLDSPIMLPNSQAMPSPTTGSFHWLSSLPLDQGNLNDAPDSSLKFKNNATLADPNPLPPYSASLNQVSSNWHMVKGGNTDCQSIVPVLPPIDFSFPEEFSKGQNAKSIESRSFNDVKMVNCSLVNVNKVEMMQISHSDEAGDESTLPKNVTLGGDIGRQPVMEKDQKETLLATGVVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQPNCQVKKKVERSHDGQITEIIYKGTHNHSKPHLGRRASGLSTDEMSDMGEAGENYAKLEGSGWKNVQPGAKDTKHGLDWKADGLERTSSTSVVTELSDPMSTNKGKPLCAFEAEDTPEHSSTLASNDGDEDGTTQALAPAEDDAEDDESDSKRRKKENYLVESTLPSRAVREPRVVVQIETEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASHNTKYVITTYEGKHNHEVPTARTNNHVSSNDGGLPPSGPNGQSALALPGSAVIPKSENHQTLTSHFDRKPEFGSDFLRPSLVGAFSNNLKFGSSPMCQMKYPSLSSTMPYSSFVLNPDRCTAPQAGSIPSVYPDFPMPLPLNLPSSGTFSLAGLNFNCAKPMNPVQPFLSGQQVKDIDTGFLRPKQEQKDDAIYGTCLPPVDHGNSSSAAPSSIYQQVMQNFPS* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2402 766 MobiDBLite consensus disorder prediction 1 40 - -
Amo04g2402 766 MobiDBLite consensus disorder prediction 560 589 - -
Amo04g2402 766 MobiDBLite consensus disorder prediction 563 579 - -
Amo04g2402 766 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 743 IPR044810 GO:0003700
Amo04g2402 766 ProSiteProfiles WRKY domain profile. 496 561 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo04g2402 766 Gene3D WRKY domain 488 554 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo04g2402 766 Gene3D WRKY domain 275 347 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo04g2402 766 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 14 743 - -
Amo04g2402 766 MobiDBLite consensus disorder prediction 399 416 - -
Amo04g2402 766 MobiDBLite consensus disorder prediction 374 474 - -
Amo04g2402 766 SUPERFAMILY WRKY DNA-binding domain 285 346 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo04g2402 766 MobiDBLite consensus disorder prediction 11 40 - -
Amo04g2402 766 MobiDBLite consensus disorder prediction 433 447 - -
Amo04g2402 766 SUPERFAMILY WRKY DNA-binding domain 494 561 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo04g2402 766 ProSiteProfiles WRKY domain profile. 282 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo04g2402 766 MobiDBLite consensus disorder prediction 339 362 - -
Amo04g2402 766 Pfam WRKY DNA -binding domain 502 559 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo04g2402 766 Pfam WRKY DNA -binding domain 288 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo04g2402 766 SMART WRKY_cls 501 560 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo04g2402 766 SMART WRKY_cls 287 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2402 Amo-Chr4 96406387 96410039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2402 31 564 WRKY Transcription Factor Family AT5G56270 41.906 2.38e-96 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo04g2402 WRKY 1.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2402 K18835 - gmx:100800211 987.638