Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2369 ATGGTTTCTTTGTCAACAAACCCCTTCTTTTCTCTAACCACCCAAAACGCTGCGTCTCGTTCTTCTTCTTCTTCTTCTTCGTTGTATTCGAGATTCGCGGCTTCAACCAAGTTCAATTCTTTCCACGCAAATAATAAAGATCATAGAAAGGTTGTTTGTGCTTGCGTCGCTCCTCCAACGAACTTCAAGAGCGAAGACTCTTCCGCCCTCAGATTCAATGGTTCATCGAAATCGGAGCAATTGAGCACACTTCGGGAACAAGATGGTGACTCTGATGTTCTTATTGAGTGTAGAGACGTCTACAAGTCATTTGGGGAAAAGAAAATCCTCAATGGTGTTAGCTTCAAGATTAGACATGGGGAAGCAGTTGGAATAATCGGTCCTTCTGGGACTGGAAAATCCACAGTTTTAAAGATTATTGCAGGATTACTTATTCCAGATAAGGGTGAGGTTTATATTCGAGGTAGAAAGAGAGTTGGTCTGGTAAGCGATGATGAGCTACATGGTCTTCGCATTGGATTAGTGTTCCAAAGTGCAGCACTTTTTGATTCTTTGACTGTCCGTGAAAATGTTGGTTTTCTCTTGTATGAACACTCAAGCATGCCTGAAGACCAGATATCAGAGGTTGTCAAGGAAACCTTGGCTGCTGTTGGATTGAAGGGAGTTGAGAATCGGTTGCCTTCTGAGTTATCAGGTGGAATGAAAAAACGAGTTGCTTTAGCTCGATCTATTATTTATGACAATTCAAAGGATTCAATTGAGCCTGAGGTTCTCTTATATGATGAACCAACTGCTGGACTAGATCCCATTGCATCAACTGTTGTTGAGGATCTAATTCGTTCAGTGCACATAAAAGGACAAGATGCACGTGGGAAACCCGGGAACATTGCATCATATGTGGTCGTCACTCACCAACATAGTACCATTAAAAGAGCCATTGACAGGTTGGTGTTTCTACACAAGGGAAAGATTGTTTGGGAAGGAATGACTCATGAATTTACAACATCAACAAATCCAATTGTTCAACAGGTAAGTGAACACAAATTGAGTTGTTTAAGAATTCGGAGTCTAGGGGCTATAAATATGTAA 1089 0.4123 MVSLSTNPFFSLTTQNAASRSSSSSSSLYSRFAASTKFNSFHANNKDHRKVVCACVAPPTNFKSEDSSALRFNGSSKSEQLSTLREQDGDSDVLIECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLIPDKGEVYIRGRKRVGLVSDDELHGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMPEDQISEVVKETLAAVGLKGVENRLPSELSGGMKKRVALARSIIYDNSKDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGQDARGKPGNIASYVVVTHQHSTIKRAIDRLVFLHKGKIVWEGMTHEFTTSTNPIVQQVSEHKLSCLRIRSLGAINM* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2369 362 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 336 IPR027417 -
Amo04g2369 362 SMART AAA_5 119 323 IPR003593 -
Amo04g2369 362 Pfam ABC transporter 110 265 IPR003439 GO:0005524
Amo04g2369 362 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 95 346 IPR003439 GO:0005524
Amo04g2369 362 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 18 348 - -
Amo04g2369 362 CDD ABC_Org_Solvent_Resistant 95 343 - -
Amo04g2369 362 ProSitePatterns ABC transporters family signature. 230 244 IPR017871 GO:0005524
Amo04g2369 362 Gene3D - 82 353 IPR027417 -
Amo04g2369 362 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 18 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2369 Amo-Chr4 95920574 95925515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2369 101 339 Calmodulin-binding Proteins AT2G36910 28.800 2.00e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2369 - - adu:107486109 654.825