Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2328 ATGGACTGGGAGATTGAAGGGAGTTGGAGAGATTTGGATATAAGAGATTTATCTTTCTCAAATAAATGTCAGCTAAAGCTTCTCATTTTAGATGGCGTGGAAGCTCCAATTCTCAGCGATATTCCTTGTACATTAAAGGTTTTGACCTGGAGAGGTTGTCCAATGAAAACTCTGCCCTTTACAGATCATCAACGCTATGAACTTGTAGAAATTGATCTGTCGCATAGCAGTATTGTACAATTATGGGATGGAAAGAAGTTTCTAAAAAAGTTAGAGCTCTTGAATCTGTCCTACTGCAAGCTGATGAAGCAAACGCCAGATTTTTCTGGGGCTCCCAATCTTAAAACACTTCATCTTGAGGAATGTAAGGGGCTGAATTATATTCACCCGTCTCTCGCACACCACAAGAGCCTTGTTGAATTAAATTTAAGGGAGTGTGGGAGTCTTGAAACACTTGCAAATAAATTGGAGATGAGGTCACTCGAGAAACTAGATCTTAATTGGTGCCAGCATTTAAGAAAACTCCCAGAGTTTGGAGAATGCATGACAAAGTTATCGATTCTTTCTTTGAGTTATACAGACATAAAGGAGCTACCCAGGACACTTGAAAATTTGGTTGGCCTGTCTGAGTTGCACTTTAGGGTATGGGAGTATATTCCCGTATCACTTGGATGTTTTGTTGGCCTAAAGAAGTTGGAGTTAAGTGGATGCAGCGAGCTTAGTTGTGTTCCATACAGCACTCATGGGTTAGAGTCCCTCGCAGTTTGGGGTTGGCATGACAGACTTTTGGGTTCTCTCTCTCTTCTGCCCTCTTTGAGTAGCCTGCAATTACGTGGAAGATTTTTCGGATCTAAAGAGTCGACCCCTTACTACGATCTTAGCCACTTAACGTCGTTGACGGATTTGGATCTATCGGTAAACGACCTTTTAAGGGTTCCAATAAATATCCGTGAACTTCCCAGACTTATACGTCTGAAGCTAAATCGTTGCTACAAATTGGAGGTTATGCCAGAGCTTCCATCAAGTCTGAGAGAATTAAACGCAGAGGATTGTCATCTACTGGATGCATCCAATGTGAATGATGTTATATCGAAGGCGTGTTGTGGCTTTGCAGAATCGGCTAGCCAAGATCGTGAAGACGTCTTGCAAATGTGGATCCATGGGAAGGAAATTCCAGCATGGTTTGAGCATCAGGAAGAAGATAACGAAGTAGCAGTCTCATTCCCTTCAACTGAAAACATCGCACTTGCTCTCTGTTTCCTATTAGATAGTTATGCCTACGAAGTAAAACCTTCGGTGATCTGCAATGGTGAAAAGTTCATCAACAAGAGTTTTCTTGAGATAGGTTTTCATACGTGTCCTCAGCATTTGTTTATTGTATGCCTGAACGGTTACTATTTAAGTAACTTGTTATGCCAATACAATTGCTTTCAAATGCTATTTCCCCGGATTGATAATACAGCAGTACAGAGATCTGGAGCACGTTGGGTGTGCAAGCAAGACATTCAAGATTTTAAGAAAAGAAAATCCCAAAACAGGGAAAAGAAAAGCAACTCTTTGAACTGA 1566 0.4112 MDWEIEGSWRDLDIRDLSFSNKCQLKLLILDGVEAPILSDIPCTLKVLTWRGCPMKTLPFTDHQRYELVEIDLSHSSIVQLWDGKKFLKKLELLNLSYCKLMKQTPDFSGAPNLKTLHLEECKGLNYIHPSLAHHKSLVELNLRECGSLETLANKLEMRSLEKLDLNWCQHLRKLPEFGECMTKLSILSLSYTDIKELPRTLENLVGLSELHFRVWEYIPVSLGCFVGLKKLELSGCSELSCVPYSTHGLESLAVWGWHDRLLGSLSLLPSLSSLQLRGRFFGSKESTPYYDLSHLTSLTDLDLSVNDLLRVPINIRELPRLIRLKLNRCYKLEVMPELPSSLRELNAEDCHLLDASNVNDVISKACCGFAESASQDREDVLQMWIHGKEIPAWFEHQEEDNEVAVSFPSTENIALALCFLLDSYAYEVKPSVICNGEKFINKSFLEIGFHTCPQHLFIVCLNGYYLSNLLCQYNCFQMLFPRIDNTAVQRSGARWVCKQDIQDFKKRKSQNREKKSNSLN* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2328 521 SUPERFAMILY L domain-like 17 355 - -
Amo04g2328 521 PANTHER - 88 255 - -
Amo04g2328 521 PANTHER - 294 372 - -
Amo04g2328 521 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 88 255 - -
Amo04g2328 521 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 294 372 - -
Amo04g2328 521 Gene3D Ribonuclease Inhibitor 10 178 IPR032675 -
Amo04g2328 521 Gene3D Ribonuclease Inhibitor 182 365 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2328 Amo-Chr4 95051944 95053602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2328 5 253 WRKY Transcription Factor Family AT4G12020 32.482 6.73e-22 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2328 - - ahf:112797503 1038.1