Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2324 ATGAAGCTCTCCATTATGTCACTTTTCATGTTGCTTCAGCTAGTCCTCAGAAATCGGCTAATTGACTCCATTTCTTATGGCTCCTTTATAATCATGTTGCCACAGCATAGAGTGATATTTGGAAAGCATGATGAGACAGATTCAGATTCATTACAGAGGGAAAGCGAGAATATGCAGGCCATGAGTCAGTTGGATACTTTCTCAAACATGCTCACTAATGACATTATTCCAAACATGCTCGACTGTGGAAAGCATACAGCACCATATTGCAGACACATTCAAGATTATTGGAAGCACCCAACAAACCACACTGCTACAAGCCGCACATTTCAGTTATTCACAGCACAACTCAAGCTTCTTTTGCTGGGATACACAACTGAACTTAAGTATATGGAGTCTGCTATAGGCAGAGCCTCTTCTAGTCCATTGCCACCACCACGATCATGGACATATCATGTGTTCTTGAGTTTTAGGGGACAAGACACCCGCAAAGGATTCACTGACCATCTCTATGCTTCACTGCAAAGGAAGGGAATCACAACTTTTAGAGATGACATGAACCTTGAGAGAGGTGAAGTTATTTCACATGAACTTCTCAGAGCAATTGAAGAGTCTATGTTCGCAGTCATTGTTCTGTCGCCAAACTATGCTTCCTCTGCTTGGTGCTTGGATGAGCTCCAAAAGATTGTTGAGTGCAAGAACAACCTGGGGCTACAGATTGTGCCAGTGTTCTACAGTGTGGACCCTTGTGATGTGAGGCACCAAAAAGGAACCTTTGAGGATGCTTTCAGGAAACAAGAAGAGAGATTGGGAGGAGACAGTGAGAAGGTCAAGAGATGGAGAGAAGCTTTAATACAAGTTGCCAATTACTCTGGATGGGACTCCAAAAATCAGGTGGAGGATGTAACTAGACTCATGTGTATTGGGTTGAGTGATGTTCGTTTTACAGGCATATGGGGCATGGGTGGTGTTGGTAAGACAACTATTGCTAGAGCAATCTATGAAGCCATTGAAGATCAATTTCAAATTAGTTGTTTTCTTGTTAACATAAGAGAGACATGTGAGACAAATGGGATACTTGAACTACAAAAAATTATTGGTGAACATATTCAAGTGAGTAGATGTACTTTCAGTAATTTGTATGATGGAATGAGGATCATAAGAAATTCTCTATGCAACAAGAAGGTTCTTATTGTTCTTGACGATGTGGATGATGTAAGCCAATTGGAGAATTTAGCTGGGAATCAAGACTGGTTTGGCCCCGGAAGCAGGGTAATGATAACAACTAGAGATATGCATCTACAAAAGACACATGAAGTGTGTGACACTTATGAGGTTGAATGTTTAGATAAAAGGGAAGCTCTTCGTTTCTTTTGCTCAAAAGCCTTCAAATGTAATGTTCCTGAAGAAGGGTATTTGGAAATGTCCCATGAAGTGGTCAAATATACTGGTGGTCTTCCATTGGCACTTAAGGGGATGCCTAAAGCCAAAGTATTAGATTTATTTGAAAAGTGTGGTTATAATCCACAAATTGAAATTGATGTTTTGATTGAGAGGTCTTTGGTTACAGTAAAGCAGGACATTGATGAGTGTATGAGAAAGTTTGATGTGTTGGAAATGCATGATTTGCTTCAAGAAATGGGGAGAGTCTTTATCATTCAAGAATCTCCAAATTACCCTAGTAAACGTAGTCGATTGTGGTCGCCAGAGGACCTTGATCTCATGCTTACACAAAACAAGGGAACTGAAACAATTCAAAGCATAGGTCTACCTCCAATAAGAAATGGGACATACTATGTGGAACGTTGGAGAGACAAAGCTTTTCCAAATATGAGTCAGCTAAAATTTCTCAACTTTGATTTTGTGAGAGCTCATATTCATATCAATATTCCAAGTACCTTAAAAGTTCTTCACTGGGAATTTTGTCCACTGGAGACCTTGTCCCTTGTGGATCAAAGATATGAACTTGTTGAAATTAAAATAAGCTGGAGTAACATTGTACAACTTTGGCATGGATTTAAGTTTCTAGAGAAGTTGAAGCACTTGGATCTAAGCTGTTCAGACTTGGAGCAAACACCAGATCTTTCAGGGGTTCCTGTTCTTGAAACACTTGATCTTTCATGTTGCGACTGCCTAACACTTATTCACCCCTCTCTCATATGCCACAAAAGCCTTCTTGTGTTGAATTTGTCGGAGTGCACAAGTCTTGAAACTTTTCCAGTTGGCCTATCTGAATTGGACTTAAGAGGTTGCAAAAAGCTTACTTGCCTTCCTGACAGTATTCTTGAATTAGAGTCCCTCAGAATTCTGCGTGCTTCTTGGTGCTCAAGTCTTTGTGATTTGCTACATTCTGTGTCACTTATCCCTTTTTTAAGCATCCTTGACTTACAAGATTGTTGTCTAACTGAGGAGTCGTTCCCTTGTGATTTCGGACAGTTTCCATCGCTGATGGATTTTGATTTATCAGGCAACCATTTTGTTAATTTGCCAATAAGTATCCATGAACTTCCCAAGCTTAAATGTCTTAGCCTTAATGGTTGCAAAAGGCTTCAAACTTTGCCCGAGCTTCCATCAAGTATAAGAGAACTGAAAGCATGGTGTTGTGATTCTCTGGACACACACAGTTTCAATAATTTATCAAAGGCATGTTCCGTTTTTGCATCAACTAGCCAAGGTTCTGGTGAGGTCTTGCAAATGGTGATTCCAGGGACGGCTATTCCATCATGGTTTGTTCATCCACAAGACAGTAACTGCTTATTAGTCCCATTCCCACATAATTTCCATCCAAGTGAAAGGCTAGGAATTGCTTTATGTTTCCTAGTGCGGCCTTCCAAACTCTGGTTTTCCCTCTCACTCCGTTTGGCCGTTGGCAATGGTGATAGAGTCATAACCAGCAGCATTCCTTTTTGGTATCATCAAGGTTATCACCTGTGTATGTTTTGTATGACCAATGATTGTTTAATTGATCAAGAAACTCGGAAAGCCATTCATTTTGAGCTGTCATTTGAAGATATCAATGTTGAATATCCACCAGAGATATTGAGCTCTGCTGCATGTTGGGTGCATACTGATGAAATTGAGCATTTGAACAAAGGGGAAACTGAGAGGCCCAAGAAGAAAAGACAAAAGATGTTAGAACAGAAGCATTGA 3150 0.4019 MKLSIMSLFMLLQLVLRNRLIDSISYGSFIIMLPQHRVIFGKHDETDSDSLQRESENMQAMSQLDTFSNMLTNDIIPNMLDCGKHTAPYCRHIQDYWKHPTNHTATSRTFQLFTAQLKLLLLGYTTELKYMESAIGRASSSPLPPPRSWTYHVFLSFRGQDTRKGFTDHLYASLQRKGITTFRDDMNLERGEVISHELLRAIEESMFAVIVLSPNYASSAWCLDELQKIVECKNNLGLQIVPVFYSVDPCDVRHQKGTFEDAFRKQEERLGGDSEKVKRWREALIQVANYSGWDSKNQVEDVTRLMCIGLSDVRFTGIWGMGGVGKTTIARAIYEAIEDQFQISCFLVNIRETCETNGILELQKIIGEHIQVSRCTFSNLYDGMRIIRNSLCNKKVLIVLDDVDDVSQLENLAGNQDWFGPGSRVMITTRDMHLQKTHEVCDTYEVECLDKREALRFFCSKAFKCNVPEEGYLEMSHEVVKYTGGLPLALKGMPKAKVLDLFEKCGYNPQIEIDVLIERSLVTVKQDIDECMRKFDVLEMHDLLQEMGRVFIIQESPNYPSKRSRLWSPEDLDLMLTQNKGTETIQSIGLPPIRNGTYYVERWRDKAFPNMSQLKFLNFDFVRAHIHINIPSTLKVLHWEFCPLETLSLVDQRYELVEIKISWSNIVQLWHGFKFLEKLKHLDLSCSDLEQTPDLSGVPVLETLDLSCCDCLTLIHPSLICHKSLLVLNLSECTSLETFPVGLSELDLRGCKKLTCLPDSILELESLRILRASWCSSLCDLLHSVSLIPFLSILDLQDCCLTEESFPCDFGQFPSLMDFDLSGNHFVNLPISIHELPKLKCLSLNGCKRLQTLPELPSSIRELKAWCCDSLDTHSFNNLSKACSVFASTSQGSGEVLQMVIPGTAIPSWFVHPQDSNCLLVPFPHNFHPSERLGIALCFLVRPSKLWFSLSLRLAVGNGDRVITSSIPFWYHQGYHLCMFCMTNDCLIDQETRKAIHFELSFEDINVEYPPEILSSAACWVHTDEIEHLNKGETERPKKKRQKMLEQKH* 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2324 1049 Gene3D - 289 442 IPR027417 -
Amo04g2324 1049 PRINTS Disease resistance protein signature 315 330 - -
Amo04g2324 1049 PRINTS Disease resistance protein signature 390 404 - -
Amo04g2324 1049 PRINTS Disease resistance protein signature 834 850 - -
Amo04g2324 1049 PRINTS Disease resistance protein signature 483 497 - -
Amo04g2324 1049 SUPERFAMILY Toll/Interleukin receptor TIR domain 145 293 IPR035897 -
Amo04g2324 1049 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 781 872 - -
Amo04g2324 1049 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 490 675 - -
Amo04g2324 1049 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 306 491 - -
Amo04g2324 1049 SMART till_3 150 290 IPR000157 GO:0007165
Amo04g2324 1049 ProSiteProfiles TIR domain profile. 149 310 IPR000157 GO:0007165
Amo04g2324 1049 Gene3D Ribonuclease Inhibitor 753 887 IPR032675 -
Amo04g2324 1049 Pfam TIR domain 151 294 IPR000157 GO:0007165
Amo04g2324 1049 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 149 298 IPR044974 GO:0006952
Amo04g2324 1049 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 781 872 IPR044974 GO:0006952
Amo04g2324 1049 Gene3D - 125 288 IPR035897 -
Amo04g2324 1049 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 300 492 IPR027417 -
Amo04g2324 1049 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 490 675 IPR044974 GO:0006952
Amo04g2324 1049 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 306 491 IPR044974 GO:0006952
Amo04g2324 1049 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 149 298 - -
Amo04g2324 1049 SUPERFAMILY L domain-like 601 881 - -
Amo04g2324 1049 Pfam NB-ARC domain 311 493 IPR002182 GO:0043531
Amo04g2324 1049 Gene3D Ribonuclease Inhibitor 599 752 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2324 Amo-Chr4 94988660 94996651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2324 144 865 WRKY Transcription Factor Family AT4G12020 25.943 1.82e-58 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2324 - - aprc:113861574 651.744