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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Amo04g2297
ATGGTAAGAGGAAAGACTCAGATGAGGCGCATAGAGAATGCAACAAGCAGGCAAGTAACATTCTCAAAGAGGCGTAACGGTTTGCTTAAGAAGGCCTTTGAGCTTTCTGTTCTTTGTGATGCTGAAGTTGCTCTCATCATCTTCTCTCCAAGAGGCAAGCTTTATGAATTTTCTAGCTCCAGCATGCAAGAGACACTTGAACGCTATCGCAGACATACACGGAATGCTCAAACAACACCTAGATCAGATGAACAAAATACGCAGCATTTGAAGCAAGAAACGGCAAGTTTGATGAAGAAGATTGAGATTCTTGAAGCTTCAAAACGAAAATTGGTGGGAGAAGGTTTGGGATCATGTACCTTAGAAGAGTTACAGCAAATAGAACAACAATTGGAAAAGAGTGTAACCAGTGTTAGAGCTAGAAAGACTCAGGTTTACAAGGAACAAATTGAGCAACTAAAGGAAAAGGAAAAAGCTCTAATTGCTGAAAATATCAAGCTTTCAGAACAGTATGGCATCCAAGCACCACAGGCAATTCTAAAGGATCAAAAAGAAAATGAACAACCCTACCCAGAAAGTAGTAGTCCAAGTTCAGATGTGGAGACCGAATTATTCATTGGACTACATAGGTCTAGTTGA
639
0.4022
MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSMQETLERYRRHTRNAQTTPRSDEQNTQHLKQETASLMKKIEILEASKRKLVGEGLGSCTLEELQQIEQQLEKSVTSVRARKTQVYKEQIEQLKEKEKALIAENIKLSEQYGIQAPQAILKDQKENEQPYPESSSPSSDVETELFIGLHRSS*
213
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Amo04g2297
212
Gene3D
-
14
96
IPR036879
GO:0003677|GO:0046983
Amo04g2297
212
CDD
MADS_MEF2_like
3
78
IPR033896
GO:0000977|GO:0045944
Amo04g2297
212
ProSiteProfiles
MADS-box domain profile.
1
61
IPR002100
GO:0003677|GO:0046983
Amo04g2297
212
PANTHER
MADS-BOX PROTEIN SOC1
1
209
-
-
Amo04g2297
212
PANTHER
MADS BOX PROTEIN
1
209
-
-
Amo04g2297
212
Pfam
SRF-type transcription factor (DNA-binding and dimerisation domain)
10
57
IPR002100
GO:0003677|GO:0046983
Amo04g2297
212
Coils
Coil
143
170
-
-
Amo04g2297
212
PRINTS
MADS domain signature
3
23
IPR002100
GO:0003677|GO:0046983
Amo04g2297
212
PRINTS
MADS domain signature
23
38
IPR002100
GO:0003677|GO:0046983
Amo04g2297
212
PRINTS
MADS domain signature
38
59
IPR002100
GO:0003677|GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Amo04g2297
Amo-Chr4
94588733
94596776
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Amo04g2297
1
158
MADS-box Gene Family
AT2G45660
77.215
1.38e-87
253
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MADS-MIKC
Amo04g2297
K-box
1.3e-26
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Amo04g2297
-
-
gmx:100037477
301.597
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