Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2294 ATGTCACTTAACGTTTACCTCAAGGATTTTTATGCTCAACTTGCAGCTCAATGGTGTTACTATTTAGCACTTGCAGTACTAATGTCAAGGGATCTATGTGTTCCTTGCATTAGAAAGTTGCAACTTTTCAAAAATGACTTTTACATTGTTTTCTTGGGAGCTCATCATACATTGAATAGTGACATTATACATGAGACACATTTAAATGTTCTAAGTTCTGTGAAGGGAAGCTATCTTGAAGCCCAAGAATCCATGGTTTACAGCTACACAAATAGCTTCAATGCATTTGCTGCAAAACTATCAGAGAATGAAGCCAAGAAGTTATCTGAAATGGATGAAGTTTTGTTGGTATTTCGAAATCAGTACCGCAAGCTACACACAACAAGATCATGGAACTTCATTGGTTTGCCAGTAACTGCCAAGAGAAGATTGCAATTTGAGAGTGACATTGTTGTTGGTGTTTTGGACACAGGGATCACTCCTGAGTCTCAAAGCTTCAAGGATGATGGATTAAGTCCTCCACCAGCAAAATGGAAAGGGAGTTGCGGCCCTTTTGCTAATTTCTCAGGATGCAATAACAAGATCATAGGAGCAAAATACTTCAAAGCAGATGGAAACTCTGATCCATCAGACATACTATCTCCCATAGATGTTCTTGGCCATGGCACTCACACTGCATCAACAGCAGCAGGCACCCTGGTCCCAAAGGCAAGCCTTTTCGGCCTGGCTAACGGGACGGCCCGCGGCGCAGTCCCCTCGGCCCGGCTGGCCATTTACAAGGTCTGCTGGACATCCAGTGGATGTGCAGACATGGACATACTTGCTGCATTTGATGCTGCCATTCATGATGGTGTGGATATCATTTCAATTTCCATTGGTGGAGGTGATCCTAGCTATGTGGTTGATGTTATATCCATTGGCTCGTTTTTCGCCGTTAGTAAAGGGATACTCACAGTGGCCTCCGCCGGAAATGATGGCCCGGATATGGCCACCGTGACGAATACTGCGCCGTGGATTGTTACAGTTGCAGCTAGTGGCATTGACAGGGCTTTCAGGAGCACTGTGATTTTAGGGAGTGGAAAGAATGTTTCTGGAATAGGAGTGAGCAGTTTCAATCCTAAACAGAAACAATATCCTCTCATCAATGGCGTCAATGCTGCTCTAAACTCTGAAGCCAAGGAATATGCTAGATACTGCTTTGGAGGTTCCTTAGATCCAAATAAGGTGAAGGGAAAGCTTGTTTATTGCAAATTAGGAACATATGGCACTGAAGCAATTGTGAAAGAAATTGGGGGAATTGGTGCCATAATTGAAAGACAAAGATATCTTGATGTTGCTCAAGTTTTCATGGCTCCTGCTACCATTGTGAATATGAGCTTAGGTCATACTATCACTAGCTATATACATTCCACAAGATCACCATCAGCAGTGATATACAAGACCCATGAAATTAGAAAGCCAGCTCCATTTGCTGCTTCATTCTCATCTAGAGGTCCAAATCCAGGGTCTCAAAATATTCTTAAGCCTGATATTGCAGCACCTGGCATTAACATCTTGGCATCTTATACACTTAGGAGGTCAATCACTGGCTTAAAAGGGGACACTCAATTTTCAAAATTTAATCTATTGTCAGGAACTTCCATGGCTTGTCCTCATGTTGCTGGAGTAGCAGCATATGTGAAGTCATTTCATCCAGATTGGACCCCTGCTGCAATCAGATCTGCCATTATTACCACAGCCAAACCAATGAGCAAGAAAATGAACAATGAAGCAGAATTTGCCTATGGTTCTGGCCAACTAAACCCGACAAGAGCTCTAACACCTGGTTTAATCTATGACATGGATCACTTTGGTTACATCCAATTCCTGTGCCATGAAGGTTACAGTGGTGCCACATTATCAGTGTTACTTGGTTCTCCTGTGAATTGCTCTTCTTATTTGCTTCCTGGTGCTATTGGCCATGATGCCATCAACTACCCCACCATGCAACTCATCTTGAAATCAAATAAAGACACGACAATTGGAGTTTTCAAAAGGACAGTGACAAATGTAGGTCTTGGTCCAACAATCTATAATGCCACTATCAAGTCACCAAAGGGAGTTGAAATCACAGTGAAACCAACCAGCCTCATATTTTCTCATACCATGCAGAAGAAGAACTTCATATTAATGGTGAAAGCTAAATCTATGGCAAGTATGAAAATTATCTCTGGGTCCCTTATATGGAGAAACTCAGTTTACTATGTTAGAAGTCCTATTGTCATTTATAGTCCATAA 2277 0.4203 MSLNVYLKDFYAQLAAQWCYYLALAVLMSRDLCVPCIRKLQLFKNDFYIVFLGAHHTLNSDIIHETHLNVLSSVKGSYLEAQESMVYSYTNSFNAFAAKLSENEAKKLSEMDEVLLVFRNQYRKLHTTRSWNFIGLPVTAKRRLQFESDIVVGVLDTGITPESQSFKDDGLSPPPAKWKGSCGPFANFSGCNNKIIGAKYFKADGNSDPSDILSPIDVLGHGTHTASTAAGTLVPKASLFGLANGTARGAVPSARLAIYKVCWTSSGCADMDILAAFDAAIHDGVDIISISIGGGDPSYVVDVISIGSFFAVSKGILTVASAGNDGPDMATVTNTAPWIVTVAASGIDRAFRSTVILGSGKNVSGIGVSSFNPKQKQYPLINGVNAALNSEAKEYARYCFGGSLDPNKVKGKLVYCKLGTYGTEAIVKEIGGIGAIIERQRYLDVAQVFMAPATIVNMSLGHTITSYIHSTRSPSAVIYKTHEIRKPAPFAASFSSRGPNPGSQNILKPDIAAPGINILASYTLRRSITGLKGDTQFSKFNLLSGTSMACPHVAGVAAYVKSFHPDWTPAAIRSAIITTAKPMSKKMNNEAEFAYGSGQLNPTRALTPGLIYDMDHFGYIQFLCHEGYSGATLSVLLGSPVNCSSYLLPGAIGHDAINYPTMQLILKSNKDTTIGVFKRTVTNVGLGPTIYNATIKSPKGVEITVKPTSLIFSHTMQKKNFILMVKAKSMASMKIISGSLIWRNSVYYVRSPIVIYSP* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2294 758 Pfam Subtilase family 148 598 IPR000209 GO:0006508|GO:0008236
Amo04g2294 758 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 47 756 IPR045051 -
Amo04g2294 758 Pfam Peptidase inhibitor I9 48 126 IPR010259 -
Amo04g2294 758 Gene3D Peptidase S8/S53 domain 149 616 IPR036852 GO:0004252|GO:0006508
Amo04g2294 758 SUPERFAMILY Subtilisin-like 125 610 IPR036852 GO:0004252|GO:0006508
Amo04g2294 758 Pfam Fibronectin type-III domain 657 755 IPR041469 -
Amo04g2294 758 CDD PA_subtilisin_like 354 478 - -
Amo04g2294 758 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 40 126 IPR037045 -
Amo04g2294 758 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Amo04g2294 758 Gene3D - 348 484 - -
Amo04g2294 758 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Amo04g2294 758 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Amo04g2294 758 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Amo04g2294 758 ProSiteProfiles Serine proteases, subtilase domain profile. 130 606 - -
Amo04g2294 758 CDD Peptidases_S8_3 124 580 IPR034197 -
Amo04g2294 758 Gene3D - 623 757 - -
Amo04g2294 758 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 47 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2294 Amo-Chr4 94544663 94551911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2294 46 594 Subtilisin-like Serine Gene Family AT4G00230 67.213 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2294 - - ccaj:109800351 1090.87