Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2288 ATGCCTAAGTATTTGATTTTGTTTTTCTTGTCAGGCATCATGATTTCTAGATTACTCTTCATATTCTTTGCCCTTATGGTGACAAATTCAATGTCTATGATGGTTCAAAAGACCTACATTGTTCACATGGACAGAACCAAAATTAGAGCTTCAATTCATTCTCAAGACATCACAAAACCATGGTTTGAATCGGTCATTGATTTCATTTCTGAATCTTCAACACAAGAAGAAGAACAAGAACAAGAGATTCTACCTCCTCAGCTTCTTTATGTATATGAAACCAACATGTTTGGTTTCGCGGTGTGCCTTTCGCAGAAGCAACTCGAATCCTTGAGCAAAGTCGATGGCTTCCTTTCAGCCTTACCGGATGAACTATTAACCCTTCACACAACACACACTCCAAATTTTCTTGGCCTAAAGAATGGAATAGGCCTTTGGAGTGCTCAAAATTTGGCCTCAGATGTAATAATTGGCATCATCGATTCGGGGATTTGGCCGGAACACACCAGCTTCAAAGATTCAGGGTTGTCCTCTGTACCTTCTCATTGGAAAGGTGTTTGTGAACAGGGCACAAAATTCTCTGCTTCAAATTGCAACAAGAAACTCATTGGTGCAAGGACTTATCTCAAAGGGTACGAAAAATCCGTAGGGAAGATCAACGACACGGCGGATTATCGTTCCCCTCGAGACTCCATAGGGCACGGAACACACACTGCTTCGACCGCAGCCGGTAGCTTGGTGAAGAATGCAAGCTTCTATGGCCTTGCTAGTGGCTCAGCAAGTGGAATGAGGAAAACTTCAAGAATTGCAGCCTATAAAGCTTGTTGGCCTGCTGGATGTGTTAATTCGGACATACTCGCTGCCATGGACCAAGCAGTTTCCGATGGAGTTGATGTGCTATCACTCTCTTTAGGTGGATTTCCTAAACCTTACTATGGTGATAGCATCGCCATAGCCTCGTTTGGTGCAGCGAAAACCGGTGTTTTTGTTTCTTGCTCTGCAGGTAATTATGGACCTCACCCGTCTACGGTTGGAAATAGCGCGCCATGGATCATGACAGTTGCAGCCAGCTACACTGACAGAACGTTTCCGACGAAAGTAAGGCTCGGCCGCGGAGAAGTTTTCCGAGGATCTTCGCTGTACCATGGAAGAAAAACAAGTCAATTGCCTCTTGTTTATGCAAAATCAGCAGGTGCTAATAAAGAAGCACAATACTGCACAGAAAATTCACTTGATCAAAATCTTGTTAAGGGGAAAATTGTTGCTTGTGAGAAAGGACTAAACAGCAGAACTGAGAAGGGAATGGTGGTTCAAAAGGCCGGTGGTGCCGGAATGATACTACTCAACTCAGAGAGCCAAGGAGGTGAGCTTCTTGCTGATCCTCACATATTGCCAGCAACTTCATTAGGTGCCTCAGAAAGTAGCATTCCTGCGCCGGCTATGGCYGCGTTTTCTTCTAGAGGYCCAAACTATTTTGGACTTGATGTGATTAAACCGGATGTTACTGCTCCCGGTGTGAACATTTTGGCGGCGTGGCCGGCGAAAGTTAGCCCAAGTTTGCTGAAAAGTGACAAAAGAAGTGTTATGTTTAACATTATTTCAGGCACTTCAATGTCATGTCCTCATGTTAGTGGCATAGCTGCATTGATCAAATCTGTTCATAAAGATTGGTCTCCTGCAGCCATAAAATCTGCATTGATGACTACTGCATACATATTGAACAATAAAGGCGATCCGATCAGGGATGCCGGATCGAATAATTCGGCTTCTGCTACTCCTTTTGCTTTTGGTTCTGGCCATGTTAACCCAGAAAGTGCATCTGATCCAGGTTTAGTATATGATATAAACACACAAGATTATTTAAATTACTTGTGTAGCCTTAACTATACAGATTCTGAGATTGCTTTGGTATCAAGAGAGAATTTTGTGTGTCCTAAAAACTCAGTTCTTCAAGCTGGTGACTTGAATTACCCTTCATTTTCTGTTCTATTTGATAGAGTGGGACAAAATTCTAGTGTGACATACAAGAGGGTTGTCACAAATGTTGCAAAATCACAAAGTGCTAATTATGTGGTTAATGTTGAACAGCCAAGGGGAGTTTCAGCTACTGTAGAACCAAGGAAACTGAAATTTGAGAAAATGGGACAGAAATTGAGCTATAGTGTGACATTTTCTTCAATTGGAAAAAGATTAAGAGATGCTGGTTCCAATTCATTTGGGTCACTGACTTGGGTTTCTGGAAAATATTACAAGGTTAGAAGTCCTATTGCTGTAACATGGCAATAG 2286 0.4226 MPKYLILFFLSGIMISRLLFIFFALMVTNSMSMMVQKTYIVHMDRTKIRASIHSQDITKPWFESVIDFISESSTQEEEQEQEILPPQLLYVYETNMFGFAVCLSQKQLESLSKVDGFLSALPDELLTLHTTHTPNFLGLKNGIGLWSAQNLASDVIIGIIDSGIWPEHTSFKDSGLSSVPSHWKGVCEQGTKFSASNCNKKLIGARTYLKGYEKSVGKINDTADYRSPRDSIGHGTHTASTAAGSLVKNASFYGLASGSASGMRKTSRIAAYKACWPAGCVNSDILAAMDQAVSDGVDVLSLSLGGFPKPYYGDSIAIASFGAAKTGVFVSCSAGNYGPHPSTVGNSAPWIMTVAASYTDRTFPTKVRLGRGEVFRGSSLYHGRKTSQLPLVYAKSAGANKEAQYCTENSLDQNLVKGKIVACEKGLNSRTEKGMVVQKAGGAGMILLNSESQGGELLADPHILPATSLGASESSIPAPAMAAFSSRGPNYFGLDVIKPDVTAPGVNILAAWPAKVSPSLLKSDKRSVMFNIISGTSMSCPHVSGIAALIKSVHKDWSPAAIKSALMTTAYILNNKGDPIRDAGSNNSASATPFAFGSGHVNPESASDPGLVYDINTQDYLNYLCSLNYTDSEIALVSRENFVCPKNSVLQAGDLNYPSFSVLFDRVGQNSSVTYKRVVTNVAKSQSANYVVNVEQPRGVSATVEPRKLKFEKMGQKLSYSVTFSSIGKRLRDAGSNSFGSLTWVSGKYYKVRSPIAVTWQ* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2288 761 Gene3D Peptidase S8/S53 domain 154 359 IPR036852 GO:0004252|GO:0006508
Amo04g2288 761 Gene3D Peptidase S8/S53 domain 476 620 IPR036852 GO:0004252|GO:0006508
Amo04g2288 761 Pfam PA domain 389 470 IPR003137 -
Amo04g2288 761 ProSiteProfiles Serine proteases, subtilase domain profile. 133 607 - -
Amo04g2288 761 Pfam Subtilase family 153 585 IPR000209 GO:0006508|GO:0008236
Amo04g2288 761 CDD PA_subtilisin_like 367 474 - -
Amo04g2288 761 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 157 168 IPR023827 -
Amo04g2288 761 SUPERFAMILY Subtilisin-like 128 611 IPR036852 GO:0004252|GO:0006508
Amo04g2288 761 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 129 IPR037045 -
Amo04g2288 761 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 761 IPR045051 -
Amo04g2288 761 ProSitePatterns Serine proteases, subtilase family, serine active site. 535 545 IPR023828 -
Amo04g2288 761 Gene3D - 360 473 - -
Amo04g2288 761 Pfam Peptidase inhibitor I9 38 129 IPR010259 -
Amo04g2288 761 Pfam Fibronectin type-III domain 654 758 IPR041469 -
Amo04g2288 761 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 29 761 - -
Amo04g2288 761 Gene3D - 624 760 - -
Amo04g2288 761 PRINTS Subtilisin serine protease family (S8) signature 152 171 IPR015500 -
Amo04g2288 761 PRINTS Subtilisin serine protease family (S8) signature 230 243 IPR015500 -
Amo04g2288 761 PRINTS Subtilisin serine protease family (S8) signature 534 550 IPR015500 -
Amo04g2288 761 CDD Peptidases_S8_3 126 571 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2288 Amo-Chr4 94340129 94342788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2288 36 761 Subtilisin-like Serine Gene Family AT1G01900 52.926 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2288 - - ahf:112797343 1452.57