Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2287 ATGGATAATAATGGATCTCCAAACCAATATCCAAACCCATACTTTTACCCTCCCAACCCTTACCAACCATACCCACCTCCACCAACTGGAATTCCAGTTCCTAATCCATATGAACATGTTCCCTATCCATACCCTTATAATCCTTCACATTCCTTCAATTATTCCTATCCCCCACCTCCTAGATCATCCTTATCATACTCTGGTTCGGGCCATATCGACTATCCCTGCCCCCCTCATCCTCAATCACCCTCCTCATGTGCCCCCTTAGACTTCAACCAGCCACCACCGAAGACATCTTATCCGGCTACTGCCCCTAGTGCTCCTACCAATCCTTACCCTGCTTATCCCTACCATGTTCCTCCAGGGAGTCAGAGTCCGTCTCGAGCTTCCCATTCTCACACCAGTAGCTTGCCATATGGATCATCTCAGTATTACTATCCACAAAATGAGGCCTATTTGTCTCCTCAGCAATCCGATGCCCACTYGCGAACCAATAGCTTTGCAGGTCCCTACTATGTGGAGAACACTAGCTCCACAGGTGGYGGAAGTGGAACCCCACAACCCAGTGATGATTCCAAGCCTTCTCCGAGTGCTATTACTTACCCGCCTTTGGATGATCTTATGAGYAATGTTCGGTTGTCCGATAGCACGCCTAGTGATATTGTGTCATCACCTCAACAGCCAGTGAGGCCCCTAATGCATTCCATTTCAACTTCAAAAATAGAGCAGAAGAAAGATGACTTTTATGGACATGCTAATAACTCCTTCTCAGGATGGGGAAATTCCTACTCTTCTCGGGTGGATTCGTCTAAACTTTCATCATCTAGTTTTGGCTCATTTAATGAGTCTGTGCAGATTGTTCCAGTGCAGAATAAAGGGTCRYTGAGAGTTCTGCTTCTACATGGAAATTTGGATATATGGGTGCTTGAGGCCAAAAATCTTCCTAATATGGACATGTTCCACAAAACATTAGGTGATATGTTCGGTAAATTACCTGGCACTATGGGCAATAAAATTGAAGGAACTATGAATAAGGTGATTACCAGTGATCCTTATGTAACAATTTCTGTAGCAAACGCTGTAATTGGGAGGACTTTTGTGATTAGCAATAGTGAAAATCCTGTTTGGATGCAACATTTCTATGTTCCTGTTGCACATCATGCTGCTGAAGTGCACTTTGTTGTTAAAGACAGTGATGTTGTCGGTTCACAGCTCATCGGCATCGTGGCAATTCCAGTGGAACAGATATACTCGGGGGAGCTGGTCGAAGGCACCTATCCCATCCTAAATAGTAGTGGGAAGCCTTGTAAGCCAGGTGCTGTTCTGAGATTATCCATTCAGTATATCCCAATGGCACAACTAAGCATTTATCATCAAGGAGTTGGAGCAGGGCCTGAGTACATTGGAGTTCCTGCGACTTATTTTCCTTTGAGGAAAGGTGGAACGGTTACTCTATATCAAGATGCTCATGTTCCAGATGGCTGCCTCCCTAACGTGTTTCTTGACAATGGGAAGACTTATGTGAATGGAAAGTGTTGGTATGACATCTATGATGCCATRCGTCAAGCTCGGCGTTTGATTTATATTACAGGATGGTCAGTGTGGCACAAAGTTACATTAATAAGGGATGGTGCTGTCAAAGCATCGGATTATGCCTTGGGTGATCTTTTGAGGTCAAAGTCACAGGAAGGAGTAAGAGTGCTTCTCCTTGTATGGGACGACCCTACATCRAGAAGCATTTTGGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAGGAAACAAGACGATTTTTCAAGAATTCTTCAGTGCATGTGCTGCTTTGTCCTCGCAGTGCTGGAAAACGACATAGCTGGTACAAGCAAAAGGAAGTTGGAACAATATATACACATCATCAGAAAACCGTTATTGTGGATGCTGATGCTGGAAATAACATGAGAAAAATAATAGCATTTGTTGGTGGACTTGATTTGTGTGATGGACGTTATGATACTCCCGATCATCATATACTTAGGACCCTGCATACACTGCATAAAGATGACTATCACAACCCTACTTTCACGGGTAATGTAGGTGGTTGTCCCCGGGAGCCATGGCATGACTTGCATTCCAAAATTGATGGTCCAGCAGCTTATGATGTTTTGAAAAATTTTGAGGAGCGCTGGTTAAGAGCTTCAAAACCTCATGGGATCAAAAAGTTAAAGAAATATGATGATGCTTTGCTTAAGCTGGAAAGAATTCCAGATATCATTCGCATGACTGATCTTCCTTGTATTGGTCATGACGATCCTGAGTCTTGGCATGTTCAGATATTTCGTTCAATTGATTCAAATTCTGTTAAAGGATTTCCAAAGGATCCAAAAGAAGCTTCTAGCAAGAACCTAGTATGTGGGAAGAATGTGCTGATCGACATGAGCATACATACAGCATATGTGAAGGCCATTCGAGCTGCACAGCATTACATTTATATAGAGAATCAATATTTCATTGGGTCTTCATACAATTGGAGTCAACATAAAGATCTTGGTGCTAATAATTTGATACCATTGGAAATTGCTCTGAAGATTGCTGAAAAGATAAAAGCACATGAAAGATTTGCAGTGTATATTGTTATTCCAATGTGGCCAGAAGGTGTTCCGACCGGGGCTGCTACACAAAGGATTCTGTATTGGCAGAATAATACAATGCAAATGATGTATGACACTGTTTACAAGGCTTTGGTTGATGCTGGGGTTGAAGCAGCATTCTCTCCACAAGACTATTTGAATTTTTTCTGTCTAGGCAATCGGGAGGCCACAAGTATGTATGATAATGTCACAGTCTCTGGAGCTCCTCCCCAGGCAAATAGTGTCCAAGCAAATAGTCGAAATAGTCGGCGTTTCATGATTTATGTTCATTCGAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGATCCGCAAACATCAATCAGCGCTCTATGGAAGGAACAAGAGACAGTGAGATTGCAATGGGAGCCTATCAACCACATTATACCTGGGCAAGAAAATCTACTTACCCCCTTGGACAAGTCCATGGATATAGGATGTCGCTTTGGGCAGAACACACAGGAACAATTGAAGATTGTTTCTTGCAGCCAGAGAGCCTCGAGTGCGTGCGAAGGGTTAAAGCGATGGGCGAAATGAACTGGAGACAGTATGCAGCAAATGAAGTAACAGAGATGAGAGGACATCTAATGAAATACCCTGTTGATGTTGATAGAAAGGGCAAAGTTAGACCCCTTCCTGGCCATGAAGAGTTCCCTGATGTTGGAGGGAAAATAGTTGGGTCATTCCTTGCCATGAAGGAGAATCTAACCATTTGA 3351 0.4291 MDNNGSPNQYPNPYFYPPNPYQPYPPPPTGIPVPNPYEHVPYPYPYNPSHSFNYSYPPPPRSSLSYSGSGHIDYPCPPHPQSPSSCAPLDFNQPPPKTSYPATAPSAPTNPYPAYPYHVPPGSQSPSRASHSHTSSLPYGSSQYYYPQNEAYLSPQQSDAHXRTNSFAGPYYVENTSSTGGGSGTPQPSDDSKPSPSAITYPPLDDLMSNVRLSDSTPSDIVSSPQQPVRPLMHSISTSKIEQKKDDFYGHANNSFSGWGNSYSSRVDSSKLSSSSFGSFNESVQIVPVQNKGSLRVLLLHGNLDIWVLEAKNLPNMDMFHKTLGDMFGKLPGTMGNKIEGTMNKVITSDPYVTISVANAVIGRTFVISNSENPVWMQHFYVPVAHHAAEVHFVVKDSDVVGSQLIGIVAIPVEQIYSGELVEGTYPILNSSGKPCKPGAVLRLSIQYIPMAQLSIYHQGVGAGPEYIGVPATYFPLRKGGTVTLYQDAHVPDGCLPNVFLDNGKTYVNGKCWYDIYDAXRQARRLIYITGWSVWHKVTLIRDGAVKASDYALGDLLRSKSQEGVRVLLLVWDDPTSRSILGYKTDGVMATHDEETRRFFKNSSVHVLLCPRSAGKRHSWYKQKEVGTIYTHHQKTVIVDADAGNNMRKIIAFVGGLDLCDGRYDTPDHHILRTLHTLHKDDYHNPTFTGNVGGCPREPWHDLHSKIDGPAAYDVLKNFEERWLRASKPHGIKKLKKYDDALLKLERIPDIIRMTDLPCIGHDDPESWHVQIFRSIDSNSVKGFPKDPKEASSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPLEIALKIAEKIKAHERFAVYIVIPMWPEGVPTGAATQRILYWQNNTMQMMYDTVYKALVDAGVEAAFSPQDYLNFFCLGNREATSMYDNVTVSGAPPQANSVQANSRNSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHYTWARKSTYPLGQVHGYRMSLWAEHTGTIEDCFLQPESLECVRRVKAMGEMNWRQYAANEVTEMRGHLMKYPVDVDRKGKVRPLPGHEEFPDVGGKIVGSFLAMKENLTI* 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2287 1116 MobiDBLite consensus disorder prediction 48 69 - -
Amo04g2287 1116 MobiDBLite consensus disorder prediction 1 227 - -
Amo04g2287 1116 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 628 663 IPR001736 GO:0003824
Amo04g2287 1116 Pfam Phospholipase D C terminal 1036 1106 IPR024632 -
Amo04g2287 1116 Pfam Phospholipase D Active site motif 963 989 IPR001736 GO:0003824
Amo04g2287 1116 Pfam Phospholipase D Active site motif 629 663 IPR001736 GO:0003824
Amo04g2287 1116 CDD C2_plant_PLD 297 449 - -
Amo04g2287 1116 Gene3D Endonuclease Chain A 504 742 - -
Amo04g2287 1116 SMART pld_4 962 989 IPR001736 GO:0003824
Amo04g2287 1116 SMART pld_4 628 663 IPR001736 GO:0003824
Amo04g2287 1116 Gene3D C2 domain 297 436 IPR035892 -
Amo04g2287 1116 SUPERFAMILY Phospholipase D/nuclease 793 1048 - -
Amo04g2287 1116 SUPERFAMILY Phospholipase D/nuclease 473 728 - -
Amo04g2287 1116 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 962 989 IPR001736 GO:0003824
Amo04g2287 1116 Pfam C2 domain 302 428 IPR000008 -
Amo04g2287 1116 SMART C2_3c 303 425 IPR000008 -
Amo04g2287 1116 MobiDBLite consensus disorder prediction 123 196 - -
Amo04g2287 1116 MobiDBLite consensus disorder prediction 94 120 - -
Amo04g2287 1116 PANTHER PHOSPHOLIPASE D ALPHA 1 209 1116 - -
Amo04g2287 1116 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 300 451 IPR035892 -
Amo04g2287 1116 PANTHER PHOSPHOLIPASE D 209 1116 IPR015679 -
Amo04g2287 1116 Gene3D Endonuclease Chain A 775 1014 - -
Amo04g2287 1116 MobiDBLite consensus disorder prediction 11 43 - -
Amo04g2287 1116 ProSiteProfiles C2 domain profile. 276 426 IPR000008 -
Amo04g2287 1116 MobiDBLite consensus disorder prediction 210 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2287 Amo-Chr4 94283334 94290908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2287 171 1116 Phospholipase D Gene Family (Wang group) AT2G42010 70.667 0.0 1421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2287 K01115 - gmx:100791059 1693.32