Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2236 ATGGGCTTCCGTTTACCTGGTATCAAAAAATCTACACAAGTAACCTCAGAGTGGAGAAGTCCCAAAAGGGTATCTTGCAGTAATGCAGTGTATGTGGGAGAAAACATGAAGAGGTTTGTGATTCCAATAGCATACTTGAACCAACCTTCTTTTCAAGACTTGTTGAGTAAAGCAGAAGAAGAATTCGGATATGTTCATCCGATGGGTGGCCTCACAATTCCATGCAGAGAAAATATGTTCTTAGATATCATATCAGTTCTGGCTTAA 267 0.397 MGFRLPGIKKSTQVTSEWRSPKRVSCSNAVYVGENMKRFVIPIAYLNQPSFQDLLSKAEEEFGYVHPMGGLTIPCRENMFLDIISVLA* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2236 88 Pfam Auxin responsive protein 23 87 IPR003676 GO:0009733
Amo04g2236 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 28 87 IPR003676 GO:0009733
Amo04g2236 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 28 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2236 Amo-Chr4 93410120 93410386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2236 13 87 Calmodulin-binding Proteins AT4G34750 37.931 6.30e-16 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2236 K14488 - gmx:100795597 115.161