Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2229 ATGGCCAGAAGATCTAAGGGACATGCCTTGGGAATCGACCTTGGTACGACTTACTCGTGTGTTGCTGTGTGGAAAGACCAGCAAAGCCGAGTGGAGATCATTCATAATGACCAGGGAAATAGAACAACTCCTTCGTGTGTTGCTTTCACAGATCAGCAGAGGTTGATTGGTGATGCTGCTAAGTACCAGGCTGCTTTTAACCCAATCAACACTAGGTTGATTGGTAGAAAATATAACGACCCCATTATTAAGGATGACCTCTTGTTGTGGCCATTTAAGGTCACAAATGGTGTTAATGACAAACCAATGATTGTTGTTACGTATAAGGGTCAGAAAAAACGTTTTTCTCCGGAAGAAATCTCAGCTATGGTTCTCACAAAGATGCGTGAGATTGCAGAGGCATATCTGGAGTCACATGTAAATAATGCTGTGATTACTGTGCCTGCTTATTTCAATGACTCTCAGCGCAAAGCTACCAAAGATGCTGGTGCCATTGCTGGCCTCAATGTGTTGCGCGTAATCAATGAACCCACAGCTGCAGCTATTGCATATGGCCTTGACAAGAGAGCTGATTGTGCTAGAAAGAGAAACATTTTCATCTTTGATCTTGGTGGTGGTACTTTCGATGTGTCTCTTCTTACTATTAAAGATAAGGTGTTTGAAGTTAAGGCCACTGCTGGAAACACACACCTTGGTGGAGAAGACTTTGATAACAGAATGGTGAACCACTTTGTGGAGGAGTTCAAAAGAAAGAACAAAGTGGATATTAGTGGAAACCCAAGAGCATTAAGAAGATTGAGAAGTACATGTGAGAGGGCAAAAAGGGTACTGTCATTCGCAGTTGATACCATTGTTGAAGTAGATGCTTTATCTCAAGGCATTGACTTGTGCTCTTCAATCACTCGAGCTAGATTTGAGGAACTAAACATGGACCTCTTTAAAGAGTGTATGAAAGCAGTTGATAGGTGTCTTACAGATGCTAAGATAGAGAAGAATTCTATACATGATGTTGTCCTCATTGGGGGATCTTCTAGGATTCCCAAAGTGCAGGAGTTATTGCAGAAGTTTTTCAACAGGAAAGATCTCTACAATAGCATTAGTCCTGATGAAGCTGTAGCTTATGGTGCAGCAGTTCAGGCTGCACTATTGAGTGAAGGCATGAAGAATGTTCCAGACATGGTGCTACGTGATGTTACACCATTGTCACTTGGTATAGCTGTACAAGGAGATATCATGAGTGTAGTGATTCCTAGGAATTCTACTATTCCTATAAAGAAGACAAAGAATATGTCACAATCCATGATAACCAATACTCTGTACTTGAAGAAGTTCATGAGGTTCACACTTTCTGGTATTCCTCCTGCTCCTCGAGGCCATCCTATTATGGTAAGCTTTGATATAGATTTTAATGGTATCCTCTGTGTATCTGCTAAGGAAAATACCACTGGCAATAAGAACCAGATTACCATAACCGATGACAAAGGAAGATTGTCAAGTGAAGAAATTGCAAGACTGGTTAGGGAAGCTGAGAAATACAAGGCTGAAGATATGAAGTTTCTTGAAAAGGCTAAAGCTATAAATGCTTTGGATGATTATGTTTACAAAATGGAGAAAGCTTTAAAGGATAAGGGCATTAGTAATAAGCTTTCCCAATATGACAAGAACAATATTAGTAATGCAATCACAAAGGCTAGAACATTTCTTGATGGTGACCAAAAGCAGGAGGTAATAAATGTGATCAAGGTTATGCTAAATGAGGTCAAACGCATCTTTGATCCCATTATGATCAAGATTGGCTAG 1800 0.4022 MARRSKGHALGIDLGTTYSCVAVWKDQQSRVEIIHNDQGNRTTPSCVAFTDQQRLIGDAAKYQAAFNPINTRLIGRKYNDPIIKDDLLLWPFKVTNGVNDKPMIVVTYKGQKKRFSPEEISAMVLTKMREIAEAYLESHVNNAVITVPAYFNDSQRKATKDAGAIAGLNVLRVINEPTAAAIAYGLDKRADCARKRNIFIFDLGGGTFDVSLLTIKDKVFEVKATAGNTHLGGEDFDNRMVNHFVEEFKRKNKVDISGNPRALRRLRSTCERAKRVLSFAVDTIVEVDALSQGIDLCSSITRARFEELNMDLFKECMKAVDRCLTDAKIEKNSIHDVVLIGGSSRIPKVQELLQKFFNRKDLYNSISPDEAVAYGAAVQAALLSEGMKNVPDMVLRDVTPLSLGIAVQGDIMSVVIPRNSTIPIKKTKNMSQSMITNTLYLKKFMRFTLSGIPPAPRGHPIMVSFDIDFNGILCVSAKENTTGNKNQITITDDKGRLSSEEIARLVREAEKYKAEDMKFLEKAKAINALDDYVYKMEKALKDKGISNKLSQYDKNNISNAITKARTFLDGDQKQEVINVIKVMLNEVKRIFDPIMIKIG* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2229 599 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 388 526 IPR029047 -
Amo04g2229 599 Gene3D - 10 381 - -
Amo04g2229 599 Gene3D - 527 599 IPR029048 -
Amo04g2229 599 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 389 530 IPR029047 -
Amo04g2229 599 ProSitePatterns Heat shock hsp70 proteins family signature 2. 200 213 IPR018181 -
Amo04g2229 599 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Amo04g2229 599 Gene3D Actin; Chain A, domain 4 232 315 - -
Amo04g2229 599 Gene3D - 72 123 - -
Amo04g2229 599 Pfam Hsp70 protein 10 591 IPR013126 GO:0005524|GO:0140662
Amo04g2229 599 ProSitePatterns Heat shock hsp70 proteins family signature 3. 337 351 IPR018181 -
Amo04g2229 599 SUPERFAMILY Actin-like ATPase domain 195 384 IPR043129 -
Amo04g2229 599 SUPERFAMILY Actin-like ATPase domain 8 188 IPR043129 -
Amo04g2229 599 PRINTS 70kDa heat shock protein signature 8 21 - -
Amo04g2229 599 PRINTS 70kDa heat shock protein signature 38 50 - -
Amo04g2229 599 PRINTS 70kDa heat shock protein signature 206 216 - -
Amo04g2229 599 PRINTS 70kDa heat shock protein signature 334 350 - -
Amo04g2229 599 PRINTS 70kDa heat shock protein signature 392 411 - -
Amo04g2229 599 PRINTS 70kDa heat shock protein signature 60 68 - -
Amo04g2229 599 PRINTS 70kDa heat shock protein signature 143 163 - -
Amo04g2229 599 PRINTS 70kDa heat shock protein signature 458 474 - -
Amo04g2229 599 PRINTS 70kDa heat shock protein signature 366 386 - -
Amo04g2229 599 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 597 - -
Amo04g2229 599 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 525 598 IPR029048 -
Amo04g2229 599 PANTHER HEAT SHOCK PROTEIN 70KDA 4 597 IPR013126 GO:0005524|GO:0140662
Amo04g2229 599 Gene3D - 189 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2229 Amo-Chr4 93327648 93329710 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2229 1 598 Calmodulin-binding Proteins AT3G12580 62.520 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2229 K03283 - gmx:102667578 829.32