Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2173 ATGGCCAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCTCGGGAACGAATTCACCGTCGTATGGCTGACCGGCGATTACTAGCGATTCTAGCTTCATGCAGGCGGATTGCAGGAGCAGGTAAGAAGGATAAAATTGGGATTACACGTTTCCACATGGCGCATGTTGATGATGTAGTTAGAGCACATATATTCTTGCTTGAGCACCCTAACCCTAAAGGGAGATATATTTGCTCACCATTTTCCATAGATATTCAAGAAATGGCTAAAATTCTTTCAGCCATGTACCCAGAATTTGAAATACCAGCAACACATGAGCTGAAGGAAATTAAGGGGTTCAAGCTACCACGTCTAATCTCAAACAAACTCATAGATGCTGGATTTGAGTTCAAGAATAGCATCGAGGATATGTTTAAGGATGCAATTGAATGCTGCGTGGATAAGGGATTTCTTTGA 456 0.4342 MASSHSVTGGVYKARERIHRRMADRRLLAILASCRRIAGAGKKDKIGITRFHMAHVDDVVRAHIFLLEHPNPKGRYICSPFSIDIQEMAKILSAMYPEFEIPATHELKEIKGFKLPRLISNKLIDAGFEFKNSIEDMFKDAIECCVDKGFL* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2173 151 PANTHER DIHYDROFLAVONOL 4-REDUCTASE-LIKE PROTEIN 44 143 - -
Amo04g2173 151 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 34 149 IPR036291 -
Amo04g2173 151 Gene3D - 19 151 - -
Amo04g2173 151 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 44 143 - -
Amo04g2173 151 AntiFam Antisense to 16S rRNA 2 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2173 Amo-Chr4 92246541 92248888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2173 53 151 Monolignol Biosynthesis Gene Families AT2G02400 33.663 7.99e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2173 - K13265 gmx:547660 174.481