Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2167 ATGAGAAGATATTTTTGGCATCTTCATAGGAGTAGTTGCCTTCCAAATTACCCCATTGTGACGCTCACAACCAACTACTCCACTATGATGCTACCTTCTCTTTCATCATCTTCATCATCGTCATCATCTTCTTCCACCAATCTCATCAACACCGTCAATTCTTCCTCGCCCTCAATACCCTCCACAACCATAACCGTTTCGGCTCCAAACTACGCTCAACACTTCAATCAAGAAATCCTACTTGACAACAATCAAAACACCACATCACCTGCAGTTTGCGGATTCTCCGGTCTGCCACTCTTTCCATCTTCACAATCGCAGAGAAACATAAGGAACAACTCTGCAAATATTGTTGAGGTTGTTACTTCTTCGCCTTCTTCCATGGATGAAAGCTCAGCCGCTTCTAATTGGATCGATGGAATATTGAAGGATCTAATTCACAGCTCTAATAGTGTCTCAATCCCTCAGCTCATCAACAACGTCAGGGAGATTATATACCCTTGCAACCCAAACTTGGCCATGCTTCTTGAGTACAGGCTCCGCCTCCTCACTTCTGACTCCTCCTCCGCCGCCGTGCCCGCAGCACCACCGCCACCACCGCCTCCACAAAACAAAACTCCGGTTATGAAGCAAACAAATACTTCAAACATGCATGCTTACGGTGCTATGCATTTTCAAGATTCATCTTTGAACCAGTACTGGCCTGTAGTACCGCCAACGCCGTTAGATTCTAACAACAACAATTCAGTTTCGTTGGCCAATACTTTACCATCACCGCCACCGCCTCCTCCGCCGCCACAGCCACCGCAACAAGAGAAACCCGAAGAAGATCTTGTTACAGCACCGGCAACCACCACGAGCACCGCCACCGCCACAGAAATGGCGGTGCTAACGAGAAAGAAAACSGAGGAGATGAATCAACAGAAGAAGAAAGACGAAGAAGGCTTGCACCTCCTCACACTACTCCTCCAGTGCGCAGAAGCAGTTTCAGCGGAGAATCTAGAAGACGCGAACAAGATGCTTCTAGAAATTTCTCAACTGTCGACGCCGTTCGGCACATCAGCGCAACGCGTGGCAGCGTATTTCTCGGAAGCCATATCCGCAAGGCTGGTCAGCTCTTGCCTCGGAATCTACGCAACGCTGCCAATCGTTCCTCACAGCCAGAAAGTGGCTTCCGCTTTCCAAGTCTTCAACGGAATCAGCCCCTTCGTCAAGTTCTCCCACTTCACCGCCAACCAAGCCATTCAAGAAGCGTTCGAGAGAGAAGAAAGGGTTCACATCATAGATCTAGATATAATGCAAGGCCTCCAGTGGCCTGGCCTCTTCCATATTCTGGCTTCCAGGCCCGGTGGGCCTCCTTACGTGAGYCTCACGGGCCTTGGAACRTCRATGGAAGCYCTSGAGGCCACTGGWAAGCGGTTATCGGATTTRGCCAATAAGCTTGGCCTTCCGTTTGAATTCTTTGGCGTTGCGGAGAAAGTTGGGAACGTTGATCCTGAGAGGCTTAATGTTAGTAAGGCTGAGGCTGTTGCTGTTCATTGGTTGCAGCATTCTCTTTATGATGTTACTGGTTCGGACACAAATACTTTGTGGCTTTTGCAGAGGTTGGCACCTAAGGTGATAACAGTGGTAGAGCAAGACCTAAGCAACACAGGTTCATTCTTGGGAAGGTTTGTGGAAGCCATACACTACTACTCAGCARTATTTGACTCCCTTGGTTCAAGCTATGGAGAAGAGAGTGAGGAGAGACATGTGGTGGAGCAGCAACTKCTCTCAAGGGAGATTCGGAATGTTCTAGCTGTTGGGGGTCCATCAAGGACTGGTGAACCAAAGTTTCATAACTGGAGGGAGAAGCTTCAACAATGTGGATTTAGAGGRATATCACTAGCTGGTAATGCTGCTACACAAGCAAGTTTGTTACTTGGTATGTTCCCTTCTGAAGGGTACACTTTGGTGGAGGACAATGGTATTCTTAAACTTGGTTGGAAGGATCTTTGTTTGCTCACTGCTTCAGCTTGGAGACCACCCTATACCACTGCAATGGCTCATCATCATAGTTAA 2061 0.4784 MRRYFWHLHRSSCLPNYPIVTLTTNYSTMMLPSLSSSSSSSSSSSTNLINTVNSSSPSIPSTTITVSAPNYAQHFNQEILLDNNQNTTSPAVCGFSGLPLFPSSQSQRNIRNNSANIVEVVTSSPSSMDESSAASNWIDGILKDLIHSSNSVSIPQLINNVREIIYPCNPNLAMLLEYRLRLLTSDSSSAAVPAAPPPPPPPQNKTPVMKQTNTSNMHAYGAMHFQDSSLNQYWPVVPPTPLDSNNNNSVSLANTLPSPPPPPPPPQPPQQEKPEEDLVTAPATTTSTATATEMAVLTRKKTEEMNQQKKKDEEGLHLLTLLLQCAEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPIVPHSQKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVSLTGLGTSMEALEATGKRLSDLANKLGLPFEFFGVAEKVGNVDPERLNVSKAEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVITVVEQDLSNTGSFLGRFVEAIHYYSAXFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEPKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPYTTAMAHHHS* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2167 686 MobiDBLite consensus disorder prediction 189 284 - -
Amo04g2167 686 MobiDBLite consensus disorder prediction 207 254 - -
Amo04g2167 686 MobiDBLite consensus disorder prediction 192 206 - -
Amo04g2167 686 MobiDBLite consensus disorder prediction 255 272 - -
Amo04g2167 686 Pfam GRAS domain family 319 674 IPR005202 -
Amo04g2167 686 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 65 676 IPR005202 -
Amo04g2167 686 ProSiteProfiles GRAS family profile. 309 674 IPR005202 -
Amo04g2167 686 PANTHER PROTEIN SCARECROW 65 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2167 Amo-Chr4 92188600 92191991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2167 316 674 GRAS Transcription Factor Family AT5G41920 56.522 1.51e-139 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo04g2167 GRAS 1.3e-120 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2167 - - gmx:100803919 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2301 12 103872907 103875600 Amo04g2167 04 92188600 92191991 PCT