Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2156 ATGGGGTCATGTAGCGGAACAGTGCCGGAATTCGAGACTGGAAGTGTTGAGCCAGTAGATGGCCTTGGTGGAAGTGGTGAATGGCATTGCGACACATTGGAAAGTTTGCTGGATATTGGAATGGAAGCGGAAGAGCAGGAGGGAGAACCGTTGGAGGATCGCGATGAAGAAGATAATGGCATCTCTGAACCAGTCATGTACAGTATTGTAGAGATATTGGAAATGGAATTCAACAACCCTGATGAGGCATCCGGTTTCTATCAACAATATATCCGGGCGAAGGGTTTTGCCATGAGGCAGGGAAAGAAACTGAAAAATAAGAAGGGGGAAATAGTTTGGTACACGTATTTATGCAACAGAGAAGGTTTCAGAGACAAAAAATGGCTAGAGATGCAGGATCAAAAGCGGGAGCACAAGGTTGTCAGACGATGTCGGTGTTTGGCGGAAATGAGGATAAAGCCGAAAAGTGACAGCGGGATTTGGTACGTTTCACGCTTCGTAGATGACCATAACCATGATGTTCTACCTGCAAATTTTGTGCCATACCTGCCTTCGTATCGGAAGATTTCTGATGCAGGCGGATTTAACCTTGTTCCTTTCACAAAGAGAGATATGTATAATGAGATTAGGAGGCAACGTGCCTTAAGGAATGGTGATGTGAATGCGCCTCTAAGGTTTTTTGAGAGATGTGCAAGGGGGGATGAGAAGATGTTCTGGAGGTTTGAAGTTGGGCCAGACCAACATATGTGTGACCTTTTTTGGAGCGACGGGCGTAGCCAGAATGATTACAAGATCTTTGGTGATGTTCTTGCCTTTGATGCGACATATGGTCGAAACAAGTACAATCTACCAATTGTTATGTTTTCCGGGGTCAACCACCACAACCAGACATGCGTGTTTGCCACGGCCATGGTCTCGTGCGAATCTCAAGCGTCGTATGTTTGA 945 0.4582 MGSCSGTVPEFETGSVEPVDGLGGSGEWHCDTLESLLDIGMEAEEQEGEPLEDRDEEDNGISEPVMYSIVEILEMEFNNPDEASGFYQQYIRAKGFAMRQGKKLKNKKGEIVWYTYLCNREGFRDKKWLEMQDQKREHKVVRRCRCLAEMRIKPKSDSGIWYVSRFVDDHNHDVLPANFVPYLPSYRKISDAGGFNLVPFTKRDMYNEIRRQRALRNGDVNAPLRFFERCARGDEKMFWRFEVGPDQHMCDLFWSDGRSQNDYKIFGDVLAFDATYGRNKYNLPIVMFSGVNHHNQTCVFATAMVSCESQASYV* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2156 314 MobiDBLite consensus disorder prediction 1 24 - -
Amo04g2156 314 Pfam FAR1 DNA-binding domain 86 175 IPR004330 -
Amo04g2156 314 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 63 314 - -
Amo04g2156 314 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 63 314 IPR031052 GO:0006355
Amo04g2156 314 Pfam MULE transposase domain 269 313 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2156 Amo-Chr4 91940324 91941809 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo04g2156 FAR1 1.4e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2156 - - ahf:112795186 649.818