Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2112 ATGAATGATTCAACTTCAAATCAGTTGAATGTGAGCGATTTAGATTATTCTTCTGAATCGAATCAATCCAGGTGTGTTGTGGATGAACAATTTGTCCCAAAGGTTAGGATGACTTTCAAGACACTGGAAGAAGTTAGAAAGTTCTACAAAGATTATTCCAAACTTGCCAGTTTTTCTACCAAAATAAAGAATACGACTCGGAAGGGAGATAAGATTAAGAATCAACTAATTACATGTAGTAGAGAGGAGAAATGGAAATCCAAGATATCTCCAACTCTGAAGACGAACCCCTCAGCTCCAATAAACTGTCCAGCCAGGATTTATGTACATTTATTGAAGGACATTGGTCTTTGGATAATTTTCAAAGTTGTTCTGAATGATTCACACTCTTGTTGTCTAGATCGAGCAGAGATGCTCAAACAACACAAGGAGCTAAGCATGTTTGTGTGTCGCACTATTGATACAATGAGAAAGTCGGGATCAGACCAAGTAAAACATATCAGTCATTCGTAG 513 0.3723 MNDSTSNQLNVSDLDYSSESNQSRCVVDEQFVPKVRMTFKTLEEVRKFYKDYSKLASFSTKIKNTTRKGDKIKNQLITCSREEKWKSKISPTLKTNPSAPINCPARIYVHLLKDIGLWIIFKVVLNDSHSCCLDRAEMLKQHKELSMFVCRTIDTMRKSGSDQVKHISHS* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2112 170 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 15 144 IPR031052 GO:0006355
Amo04g2112 170 Pfam FAR1 DNA-binding domain 47 131 IPR004330 -
Amo04g2112 170 PANTHER OS03G0843700 PROTEIN 15 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2112 Amo-Chr4 91102515 91103373 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo04g2112 FAR1 6.2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2112 - - adu:107470220 241.121