Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2058 AGTTCTGTTAGATACATAGATCACACTATGAAAATGAAGATGCAATCGTATTGCATATTCCTACTACTGTTTCTGATTCTTTTTACTTCACCAAAACCAGTGCTATCTGATGACACTTCATTCAATGATGATGTTTTGGGTTTGATTGTYTTCAAAGCCGGTTTGGATGATCCAAAGGGTAAACTTTCTTCATGGAATGAAGATGATTTAACCCCTTGCAATTGGGATGGTGTGGATTGTGACCTRTCAACAAAAAGGGTCAATTCCCTTGTTCTTGATGGTTTCTCTCTTTCTGGCCATGTTGATAGAGGACTCTTGAGGCTTCAAAATCTAAAGATTCTCTCACTTGCAAGGAACAACTTCACTGGCACCATAAACCCTGATCTTCCTTCATCACTTGGTGGATTGCAAGTTGTTGACTTTAGTGACAACAATCTCTCTGGTTCAATCCCTGAAGGGTTCTTCAACCAATGTGGCTCTCTTAGAACAGTTTCCTTTGCCAAGAACAACCTCACAGGTAAGGTTCCTGATTCCTTGAGCTCATGCTCCACATTGGTGAATGTTAACTTTTCATACAATCAAATTTCTGGTATATTGCCATCTGGGGTGTGGTTCTTGAGGGCAATACAGTCATTTGATCTGTCAAATAACTTGCTTGAAGGAGAGATTCCTGAGGGAATTAAGAATCTGTATGATTTGAGGGAGTTGAATTTGCAGAATAATCACTTTAGTGGAAAGATTCCTGAAGAAATTGGAGGGTGCTTGGTTTTGAAATCAGTGGATTTGAGTGGTAATTTTCTCTCTGGGGAACTTCCTGAGTCAATGCAAAGACTCACTTCATGCACATCACTCAGTTTGCAGAGAAATTCCCTCACRGGAACCATTCCTGATTGGATTGGAGGGTTGAAAAGTCTAGAGATTTTGGATCTTTCAGCTAATGAACTTTCCGGTTGGATTCCGAAATCATTAGGGAATTTAGACTCACTGCTTAGGTTGAATTTGTCCAGGAATCAGTTCACAAGAAACTTGCCGTTTTCGATGGCGAATTGTTCTAAGCTTTCGACATTCGACATAAGCCAGAATGAATTTTCAGGCCATATTCCTTGGTGGATATTCATAATGGGTTTGCAAGGTTCACCTTTCCATGATCTTGAAGTGTTGGATTTGTCATCCAATGCATTTTCTGGTGAGCTTCCATATGGCATTGGGAACCTTAGCAGTTTGCAAGTGTTGAATGTTTCCGGCAACAATATCTCTGGCTCGATTCCTGTGACCATAGGAGAACTCAAATCTTTYTACATTCTTGATTTGAGTGACAACAAGATTAATGGAAGCATTCCTTCTGAAATTCAAGGTGCAKGTTCACTCAGTGAATTGAGGCTACAAAGGAACTTCCTAAGTGGGAGAATTCCAGCCGAAATCGACAAGTGTTCATCTTTAACATCTTTGATACTTTCTCACAACAAGCTTACTGGTTCAATCCCAGCATCAATTGCAAACCTCACAAATCTTCAATATGTTGATTTGTCATGGAATGAAGTCTCTGGAGGTTTACCGAAGGAGCTTACAAATCTTTCACACCTTCTTGGTTTTAATGTATCCTACAACCAGCTTCAGGGTGAGCTACCAGTGGGTGGATTCTTCAACACCATCTCACCCTCATCTGTCTCCGGCAACTCATTGTTATGTGGTTCTGTTGTCAATCAATCCTGTCCATCCGACCACCCGAAACCTATTGTCTTAAACCCGAATTCTTCAAGTTCCAACTCCAGCATTTCGGCCCAGAATCGCCATCATAAGATCATACTCAGTATCTCAGCTCTTATTGCTATAGGAGCAGCTGCTTTTATAGCAGTTGGTGTGGTGGCTATTACAGTCTTAAACATTCATGTGCGCAATTCAATGGCTCGTTCGGCTGCTCAGTTTGCATTCTCTGGTGGTGAGGACTATAGTGGTTCGCCCGAAAATGATCCAAACTATGGCAAGCTTGTCATGTTTTCTGGTGATGCAGACTTTGCAGATGGAGCTCATAATCTTCTTAATAAAGACAGTGAAATAGGCCGTGGAGGATTCGGAGTTGTTTATCGCACTGTCCTTCGAGACGGCCACTCTGTTGCAATCAAGAAGCTTACAGTGTCCAGTTTGATCAAGTCCCAAGATGACTTTGAAAGGGAAGTGAAAAATCTCGGCAAGGTTAGACACCAAAACCTGGTGACACTCGAAGGCTATTACTGGACTTCATCTTTGCAGCTTCTCATTTATGAGTACTTATCCAAAGGGAGTTTGCATAAACTCCTCCATGATGATAATAACAGCAAAGATGTCTTTTCTTGGAGACAAAGGTTCCGGATTATTCTCGGCATGGCYAAAGGYTTAGCTCATTTGCACCAGATGGACATAATKCATTACAATCTTAAGTCAACCAATGTACTGATTGATTGTTCCAGCGAGGCGAAAATAGGAGARTATGGCCTAGTAAAGCTATTGCCAATGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGCGCGCTCGGCTACATGGCTCCGGAGTTTGCTTGCCGAACAGTTAAGATAACCGAGAAATGTGATGTGTATGGCTTTGGAATCCTTGTTCTTGAGGTGGTGACCGGAAGAAGGCCTGTGGAATACATGGAGGATGATGTGGTTGTTCTTTGTGACATGGTGAGAGGTGCATTGGAGGAAGGCAAGGTTGAGCAATGTGTTGATGGGAGGCTACTTGGTAATTTCGCAGCCGAAGAAGCAATTCCTGTGATCAAATTGGGGTTGATTTGTGCCTCACAAGTGCCGTCGAACCGGCCGGATATGGCCGAGGTAATCAACATACTAGAGTTAATCCAATGCCCTTCAGAAGGACAAGAGGAGTTAGAATGA 2895 0.4204 SSVRYIDHTMKMKMQSYCIFLLLFLILFTSPKPVLSDDTSFNDDVLGLIVFKAGLDDPKGKLSSWNEDDLTPCNWDGVDCDLSTKRVNSLVLDGFSLSGHVDRGLLRLQNLKILSLARNNFTGTINPDLPSSLGGLQVVDFSDNNLSGSIPEGFFNQCGSLRTVSFAKNNLTGKVPDSLSSCSTLVNVNFSYNQISGILPSGVWFLRAIQSFDLSNNLLEGEIPEGIKNLYDLRELNLQNNHFSGKIPEEIGGCLVLKSVDLSGNFLSGELPESMQRLTSCTSLSLQRNSLTGTIPDWIGGLKSLEILDLSANELSGWIPKSLGNLDSLLRLNLSRNQFTRNLPFSMANCSKLSTFDISQNEFSGHIPWWIFIMGLQGSPFHDLEVLDLSSNAFSGELPYGIGNLSSLQVLNVSGNNISGSIPVTIGELKSFYILDLSDNKINGSIPSEIQGAXSLSELRLQRNFLSGRIPAEIDKCSSLTSLILSHNKLTGSIPASIANLTNLQYVDLSWNEVSGGLPKELTNLSHLLGFNVSYNQLQGELPVGGFFNTISPSSVSGNSLLCGSVVNQSCPSDHPKPIVLNPNSSSSNSSISAQNRHHKIILSISALIAIGAAAFIAVGVVAITVLNIHVRNSMARSAAQFAFSGGEDYSGSPENDPNYGKLVMFSGDADFADGAHNLLNKDSEIGRGGFGVVYRTVLRDGHSVAIKKLTVSSLIKSQDDFEREVKNLGKVRHQNLVTLEGYYWTSSLQLLIYEYLSKGSLHKLLHDDNNSKDVFSWRQRFRIILGMAKGLAHLHQMDIXHYNLKSTNVLIDCSSEAKIGEYGLVKLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGRRPVEYMEDDVVVLCDMVRGALEEGKVEQCVDGRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVINILELIQCPSEGQEELE* 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2058 964 SUPERFAMILY Protein kinase-like (PK-like) 681 954 IPR011009 -
Amo04g2058 964 SMART LRR_sd22_2 302 328 - -
Amo04g2058 964 SMART LRR_sd22_2 501 527 - -
Amo04g2058 964 SMART LRR_sd22_2 429 452 - -
Amo04g2058 964 SUPERFAMILY L domain-like 59 371 - -
Amo04g2058 964 Pfam Protein kinase domain 681 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2058 964 Gene3D Ribonuclease Inhibitor 324 578 IPR032675 -
Amo04g2058 964 SMART LRR_typ_2 501 524 IPR003591 -
Amo04g2058 964 SMART LRR_typ_2 525 549 IPR003591 -
Amo04g2058 964 SMART LRR_typ_2 405 429 IPR003591 -
Amo04g2058 964 SMART LRR_typ_2 230 254 IPR003591 -
Amo04g2058 964 SMART LRR_typ_2 133 157 IPR003591 -
Amo04g2058 964 SMART LRR_typ_2 206 229 IPR003591 -
Amo04g2058 964 SMART LRR_typ_2 302 325 IPR003591 -
Amo04g2058 964 SMART LRR_typ_2 108 132 IPR003591 -
Amo04g2058 964 SMART LRR_typ_2 326 350 IPR003591 -
Amo04g2058 964 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 19 955 - -
Amo04g2058 964 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Amo04g2058 964 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 19 955 - -
Amo04g2058 964 Pfam Leucine Rich repeat 406 420 IPR001611 GO:0005515
Amo04g2058 964 Gene3D Ribonuclease Inhibitor 261 323 IPR032675 -
Amo04g2058 964 Gene3D Phosphorylase Kinase; domain 1 669 756 - -
Amo04g2058 964 Gene3D Ribonuclease Inhibitor 41 260 IPR032675 -
Amo04g2058 964 Pfam Leucine rich repeat 455 513 IPR001611 GO:0005515
Amo04g2058 964 Pfam Leucine rich repeat 282 339 IPR001611 GO:0005515
Amo04g2058 964 Gene3D Transferase(Phosphotransferase) domain 1 757 957 - -
Amo04g2058 964 Pfam Leucine Rich Repeat 233 254 IPR001611 GO:0005515
Amo04g2058 964 ProSiteProfiles Protein kinase domain profile. 680 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2058 964 SUPERFAMILY RNI-like 283 540 - -
Amo04g2058 964 ProSitePatterns Protein kinases ATP-binding region signature. 686 709 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2058 Amo-Chr4 90358818 90362141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2058 20 961 Receptor kinase-like Gene Family AT5G01890 60.372 0.0 1107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Amo04g2058 Pkinase 5.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2058 - - gmx:100813535 1499.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3049 14 128957529 128961702 Amo04g2058 04 90358818 90362141 hybridization
Amo04g2058 04 90358818 90362141 Amo12g2528 12 108802238 108805669 PCT
Amo04g2058 04 90358818 90362141 Amo02g2719 02 84215997 84219923 PCT
Amo12g2528 12 108802238 108805669 Amo04g2058 04 90358818 90362141 PCT
Amo02g2719 02 84215997 84219923 Amo04g2058 04 90358818 90362141 PCT