Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2037 GTTAGTGACAGACGCAAAAGAATCACTGGATTCTTTTCCAACCTAATTGAGAACCGACATATGATTAGCCGTGCTAAGTTTTGCAACTATGCTTGTGTGGAACACTTTTTGAAACAAAAGGGTGATAATGTCAAACGAGCTGCCAAGCAACTCAAGTCTTGCCTTTCTTGGAGAGACTCCATAGACATCGTTTCATGCAAGCAGCCTTCCCAGCCACCTCCTCTCATGGTGCCCATTACTGTTATCAATGGAGCTACTGCCAAAAGAGCTGGTACCTACTGCTTCCTCTCTCTAATGGCAAAGCCTAGTTTATTCTTTATATTTTCTTGTGCTACATTTACATTATGTTTGGATGGAACATTGCCTGCCTATCACTTTCATCCTGGATCCGGATCAGGAGCCAATAGTTGGCTCATTGACTTAGAGCTTATAATGATGGTTGCATATCAAATCCCCAAATCGAAAGTCACTGGAACTAGACCAGATGTTGAGGGGAGCTTCACTTGTGAATTTGATTTGATACTTGGAAAACAGATGAGAAATGGAAAAATATAA 555 0.4126 VSDRRKRITGFFSNLIENRHMISRAKFCNYACVEHFLKQKGDNVKRAAKQLKSCLSWRDSIDIVSCKQPSQPPPLMVPITVINGATAKRAGTYCFLSLMAKPSLFFIFSCATFTLCLDGTLPAYHFHPGSGSGANSWLIDLELIMMVAYQIPKSKVTGTRPDVEGSFTCEFDLILGKQMRNGKI* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2037 184 SUPERFAMILY CRAL/TRIO N-terminal domain 12 63 IPR036273 -
Amo04g2037 184 Pfam Pectinacetylesterase 114 142 IPR004963 GO:0016787
Amo04g2037 184 PANTHER PECTIN ACETYLESTERASE 113 142 - -
Amo04g2037 184 PANTHER NOTUM-RELATED 113 142 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2037 Amo-Chr4 89933537 89937940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2037 58 142 Carbohydrate Esterase AT2G46930 42.391 3.53e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2037 - K19882 aip:107643678 78.9517