Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2034 ATGGAGCCTCGAAATGGTGATGGTGATGGTGATGATGGGAAGACAAAGAAGGGGCAATATGAAGGTCCTGATCCGGACTTAGCTGGGATGCTCGAAAGGGACGTGTTAGAGACGTCACCCGGAGTGAGATGGGATGATGTTGTAGGCCTCACTGAAGCCAAGAGGCTTCTTGAAGAAGCTGTTGTCCTTCCATTATGGATGCCTGAGTATTTCCAGGGGATTAGGAGACCGTGGAAAGGTGTTCTCATGTTTGGTCCTCCCGGAACTGGGAAGACACTTCTTGCTAAAGCAGTTGCTACTGAATGCGGTACCACTTTCTTTAATGTTTCTTCCGCAACTTTAGCTTCCAAATGGCGTGGTGAGAGTGAACGCATGGTGCGGTRTTTGTTTGATCTTRCAAGAGCATATGCACMAAGTACAATTTTCATTGATGAAATTGATTCTCTGTGCAATGCTAGGGGGGCTTCTGGGAAACATGAATCATCCAAAAGGGTGAAGTCTGAACTTCTAGTTCAGGTTGATGGTGTAAACAATAGTTCCACAAATGAAGATAGTACCCGTAAAATAGTAATGGTTTTGGTAGCCATAAACTTCCCTTGGGACATAAATGAGGCACTGAGGCGAAGGCTGGAAAAGCGTATATACATTCCTCTTCCGAATTTTGAGAGTCGTAAAGAGTTGATCCGTATCAATTTGAAGACTGTGGCCCCTGATGTCAATATAGATGAYGTGGCTCGCCGTACAGAAGGYTATAGTGGAGATGATTTGACAAATATCAAGAACATGCCCAAGRATGAGATTTCAAAGGATCCTGTTGCTATGTGTGAMTTTGAGGAAGYTTTGAAGAAAGTCCAGCGAAGTGTTTCTCAAGCTGACATCGAACGTTATGTTACAAATTTATAA 903 0.4341 MEPRNGDGDGDDGKTKKGQYEGPDPDLAGMLERDVLETSPGVRWDDVVGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRXLFDLXRAYAXSTIFIDEIDSLCNARGASGKHESSKRVKSELLVQVDGVNNSSTNEDSTRKIVMVLVAINFPWDINEALRRRLEKRIYIPLPNFESRKELIRINLKTVAPDVNIDDVARRTEGYSGDDLTNIKNMPKXEISKDPVAMCXFEEXLKKVQRSVSQADIERYVTNL* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2034 300 Pfam ATPase family associated with various cellular activities (AAA) 81 218 IPR003959 GO:0005524|GO:0016887
Amo04g2034 300 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 7 259 - -
Amo04g2034 300 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 258 296 - -
Amo04g2034 300 PANTHER AAA DOMAIN-CONTAINING 258 296 - -
Amo04g2034 300 CDD AAA 75 218 - -
Amo04g2034 300 PANTHER AAA DOMAIN-CONTAINING 7 259 - -
Amo04g2034 300 Gene3D - 219 284 - -
Amo04g2034 300 SMART AAA_5 77 220 IPR003593 -
Amo04g2034 300 Gene3D - 40 297 IPR027417 -
Amo04g2034 300 MobiDBLite consensus disorder prediction 1 29 - -
Amo04g2034 300 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 291 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2034 Amo-Chr4 89800352 89802924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2034 33 259 Calmodulin-binding Proteins AT3G56690 42.060 3.12e-43 156