Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2014 ATGAATAAGGGGAGATTTGGAGAGTGCAATGGTAATTGTGGTGATGGAGTAGTTATGAAGCAGGCTCAGTTTGGATATGTTGAAACTGATCCTTCTGGAAGATATGGTCGTTTGAAGGATGTGCTAGGCAAAGGAGCAATGAAAACAGTGTACAGAGCATTTGATGAATACCTTGGAATAGAAGTGGCATGGAACCAAGTGCACCTTGGTGATGCATTTCATTCAGCAGAACAACTTCAACGTCTTTACTCAGAGGTTCATCTCCTCAAGCACCTCACCCACAAATCAATGATGATCTTCTATGGTTCTTGGATTGATCTCAATCGCAAAACCTTCAACTTCATCACCGAATTGTTCACTTCCGGTACCCTTAGAGAGTATAGGCAGAAGTATAGAAGAGTGGAAATGAGAGTGCTGAAGAATTGGGCACGCCAGATTCTGAGTGGATTGGAGTATTTGCACAGCAACAACCCACCTGTGATCCATAGAGACCTCAAATGTGACAATATCTTTGTCAATGGCCATTTGGGCCAAGTCAAAATTGGTGACTTAGGCCTTGCAGCTATACTTCTTAGCTCCAAACATGCTCACAGTGTTATAGGCACACCAGAGTTCATGGCACCAGAGTTGTATGAAGAAGAGTACAATGAGCTTGTAGACATATACTCATTTGGGATGTGCATGATTGAGATGCTTACTTTTGAGTTCCCATATAGTGAATGCTTCAACCCTGCTCAAATATACAAGAAAGTTATTTCGGGTAAGCTACCAAATGCATATTACAAGATCAAAGATTTTGAAGCCCAAAGATTTGTGGGGAAATGTTTGGCACATGTGTCAAAGAGGCCATCGGCAAAGGAGCTATTGTTGGACCCATTTTTGGCCATTGATGATCCAATTGCTTCACCGTTAATGCCAATCATAAAACTACCCACAAATCAAGCTTTGAAGCTTAATGCAACTGTAGAAGTTGCAAAGAGCACAGACATGACCATCACTGGGTCAATGAATGAGGTGGACATCAACACTGTTTTTCTTAAAGTCAAGATTTCTGACGCTAATGGGCACACAAGAAACGTGTTCTTTCCATTTGACACAATAAAGGACACAGCTATGGAGGTAGCCATGGAAATGGTAAAGGAACTTGAAATCAGCCACTTGGAACCATTGGATATTGCTGCAATGATAGATCATGAGGTATCAGCTTTAGTTCCAACTTGGAGGGACCCTTCTTGTTTTCATCAACAACACCAAAGACAGGATAGCTTTAACTATGAAGAAGAAGATGAAGACATAAATAACCATCATCCTTTCTTCTTACCATCATCGTCGTCGTCGTCATCATCAACAACTCCATCTTCTGGCTCACTCAACATGTCTTGTTCCTCATACAAGACCCGTTTTAATAATAATGGGAATACTTGTCCCTCTCAATGGCCTCAAGAGGATCCATTATCAATGAATGATGATGCAAGCTCTCTAAGCTCAATGAACTCCATCAAATGTTCCAATGTTCAGTACTGTGACAACTCATCATCAAGAAATGAAGAAAATGAGAACAATAATAATGTACCAACAACAACAAAAGTGTTGAAGGGCCATTTTGACGAAGGGCTATTTGAAGAAGCTAATTACACCAATAAACAACTTTGCAACCCAAGAATAAGGAACACTTGCAATAATAAAAATCATTGCATGTGTAATAATAATGGTCATGGACATGGATGGCCTAGACTAACGAGGATTCAATCTTGCGTGGAAGAGAGGAGAACCCAACATCTTCAACGTTTGATTATGTTGGAGGAGATGTGCAATTTCAAGAATAACACTGTTGGAACCATGGAGAACATTGGGTTTTTGAAACTGGAAAGAGGTCGCAGATGCTTTGGTACTCGTTGA 1899 0.4055 MNKGRFGECNGNCGDGVVMKQAQFGYVETDPSGRYGRLKDVLGKGAMKTVYRAFDEYLGIEVAWNQVHLGDAFHSAEQLQRLYSEVHLLKHLTHKSMMIFYGSWIDLNRKTFNFITELFTSGTLREYRQKYRRVEMRVLKNWARQILSGLEYLHSNNPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILLSSKHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIEMLTFEFPYSECFNPAQIYKKVISGKLPNAYYKIKDFEAQRFVGKCLAHVSKRPSAKELLLDPFLAIDDPIASPLMPIIKLPTNQALKLNATVEVAKSTDMTITGSMNEVDINTVFLKVKISDANGHTRNVFFPFDTIKDTAMEVAMEMVKELEISHLEPLDIAAMIDHEVSALVPTWRDPSCFHQQHQRQDSFNYEEEDEDINNHHPFFLPSSSSSSSSTTPSSGSLNMSCSSYKTRFNNNGNTCPSQWPQEDPLSMNDDASSLSSMNSIKCSNVQYCDNSSSRNEENENNNNVPTTTKVLKGHFDEGLFEEANYTNKQLCNPRIRNTCNNKNHCMCNNNGHGHGWPRLTRIQSCVEERRTQHLQRLIMLEEMCNFKNNTVGTMENIGFLKLERGRRCFGTR* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2014 632 MobiDBLite consensus disorder prediction 418 456 - -
Amo04g2014 632 Gene3D Transferase(Phosphotransferase) domain 1 119 298 - -
Amo04g2014 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Amo04g2014 632 ProSiteProfiles Protein kinase domain profile. 36 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2014 632 SMART serkin_6 36 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2014 632 MobiDBLite consensus disorder prediction 472 493 - -
Amo04g2014 632 CDD STKc_WNK 34 294 - -
Amo04g2014 632 MobiDBLite consensus disorder prediction 420 435 - -
Amo04g2014 632 PANTHER WNK KINASE 1 620 - -
Amo04g2014 632 MobiDBLite consensus disorder prediction 437 456 - -
Amo04g2014 632 Pfam Protein kinase domain 39 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2014 632 SUPERFAMILY Protein kinase-like (PK-like) 38 477 IPR011009 -
Amo04g2014 632 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 620 - -
Amo04g2014 632 Gene3D Phosphorylase Kinase; domain 1 20 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2014 Amo-Chr4 89529517 89535268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2014 24 431 MAP Kinase Kinase Kinase AT3G51630 64.678 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Amo04g2014 Pkinase 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2014 K08867 - gmx:100272206 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3024 14 127953947 127958916 Amo04g2014 04 89529517 89535268 hybridization