Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo04g1978 | ATGGCAGAGCGTGTGTTCCTCACTCATCCTTCGCTCACTTTACCATCTCAACCGTTTCCAACAACTAGAATGGCCTCCACCGCCACAGCCGCCATCGCTGCCTCACGCATTATTCCCTCCGCCACCGCACTCTCCTCTTCAGCTTCCCGCTCCTTCTTCTCCTCCTCTTCCACTTCTCGTTCCTCGCTCAAATGCCTCCACCTTCACTCTTCTTCACGTATCTCTCACCTCTTCGTCAATCAGCGAAGAGCTGAGGTTCGTGTTTCGAGTGGAGACTATGCAACGGTTTCTTCTCCGAAGTCGTTGGCGTCTGATCCTGACCAGCTGAAGAGTGCTCGAGAAGATATCAAGGAGCTTCTCAGGACAAAGTTCTGCCATCCGATTCTGATTCGTTTGGGATGGCATGATGCTGGTACCTACAATAAGAATATTGAGGAATGGCCACAGAGAGGTGGTGCTAATGGTAGTTTAAGATTTGAAGTTGAGCTGAAACATGCAGCCAATGCTGGACTCGTGAATGCATTGAAGCTTATTCAGCCAATCAAAGACAAATATGCTCGTGTGACATATGCAGACTTATTTCAGTTGGCTGGTGCTACTGCTGTTGAGGAAGCTGGAGGCCCAAAAATCCCTATGAAATATGGAAGAGTGGATGTCTCATCACCTGAACAATGTCCTGAAGAAGGCAGACTTCCAGATGCTGGTCCTCCCTCACCGGCTGATCATTTGCGTCAAGTTTTCTACAGAATGGGTTTGAATGACAAGGAAATTGTTGCATTATCTGGTGCGCACACACTGGGAAGGTCCAGACCTGAACGAAGTGGCTGGGGCAAGCCTGAGACTAAATATACAAAAGATGGACCAGGAGCACCTGGAGGACAATCCTGGACAGTACAATGGTTGAAGTTTGATAACTCATACTTCAAGGACATCAAGGAAAAAAAGGATGAAGATTTATTGGTATTGCCAACAGATGCTGTTCTTTTTGAGGATCCATCCTTCAAGGTTTATGCTGAGAAGTATGCTGAGGATCAGGTAGCATTCTTCAACGATTATGCTGAAGCCCATGCCAAGCTAAGCAACCTTGGTGCAAAATTTGATCCTCCAGAGGGCATAGTATTAGATCCTTCTCCAAAGCCACAAGCAGAGAAGTTTGAAGCAGCAAAGTACTCAACTGGAAAGAGAGAGCTATCTGATGCTATGAAGCAGAAGATTCGATCCGAGTATGAGGCAATTGGTGGAAGCCCAGATAAGCCCCTACAGTCAAACTATTTTCTTAATATCATGATTATCATTGCTGTTTTGGCACTTTTGACATCACTGCTTGGAAACTAG | 1335 | 0.4629 | MAERVFLTHPSLTLPSQPFPTTRMASTATAAIAASRIIPSATALSSSASRSFFSSSSTSRSSLKCLHLHSSSRISHLFVNQRRAEVRVSSGDYATVSSPKSLASDPDQLKSAREDIKELLRTKFCHPILIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEVELKHAANAGLVNALKLIQPIKDKYARVTYADLFQLAGATAVEEAGGPKIPMKYGRVDVSSPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKEKKDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQVAFFNDYAEAHAKLSNLGAKFDPPEGIVLDPSPKPQAEKFEAAKYSTGKRELSDAMKQKIRSEYEAIGGSPDKPLQSNYFLNIMIIIAVLALLTSLLGN* | 445 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo04g1978 | 444 | Gene3D | Peroxidase, domain 2 | 234 | 357 | - | - | |
| Amo04g1978 | 444 | ProSiteProfiles | Plant heme peroxidase family profile. | 129 | 413 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo04g1978 | 444 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 256 | 266 | IPR019793 | - | |
| Amo04g1978 | 444 | PRINTS | Plant ascorbate peroxidase signature | 105 | 125 | IPR002207 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo04g1978 | 444 | PRINTS | Plant ascorbate peroxidase signature | 126 | 141 | IPR002207 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo04g1978 | 444 | PRINTS | Plant ascorbate peroxidase signature | 187 | 205 | IPR002207 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo04g1978 | 444 | PRINTS | Plant ascorbate peroxidase signature | 206 | 218 | IPR002207 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo04g1978 | 444 | PRINTS | Haem peroxidase superfamily signature | 126 | 140 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo04g1978 | 444 | PRINTS | Haem peroxidase superfamily signature | 188 | 205 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo04g1978 | 444 | PRINTS | Haem peroxidase superfamily signature | 206 | 218 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo04g1978 | 444 | PRINTS | Haem peroxidase superfamily signature | 256 | 271 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo04g1978 | 444 | PRINTS | Haem peroxidase superfamily signature | 296 | 311 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo04g1978 | 444 | MobiDBLite | consensus disorder prediction | 264 | 291 | - | - | |
| Amo04g1978 | 444 | PANTHER | L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED | 23 | 380 | - | - | |
| Amo04g1978 | 444 | PANTHER | L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED | 396 | 444 | - | - | |
| Amo04g1978 | 444 | Pfam | Peroxidase | 113 | 344 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo04g1978 | 444 | MobiDBLite | consensus disorder prediction | 219 | 240 | - | - | |
| Amo04g1978 | 444 | PANTHER | THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED | 23 | 380 | IPR044831 | GO:0004601|GO:0034599 | |
| Amo04g1978 | 444 | PANTHER | THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED | 396 | 444 | IPR044831 | GO:0004601|GO:0034599 | |
| Amo04g1978 | 444 | CDD | ascorbate_peroxidase | 101 | 367 | - | - | |
| Amo04g1978 | 444 | SUPERFAMILY | Heme-dependent peroxidases | 105 | 365 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo04g1978 | 444 | Gene3D | - | 112 | 365 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo04g1978 | Amo-Chr4 | 88521527 | 88527503 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo04g1978 | 129 | 362 | Peroxidase | AT4G36430 | 28.571 | 2.32e-18 | 84.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo04g1978 | K00434 | - | zju:107421087 | 654.825 |