Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1976 ATGGAGTCGTTGCAGAAGAAGGTTGTGTTTGACGGAGAAGCGGCGTCGATGGTGATGAAGGAGCTGAGAGGGAGCTTCCGTTCTGGAAAGACTAGAAGCTACGAGTGGAGAGTGTCGCAGGTGAAGGCACTGCTGAAGATGGTGACTGACAACGAGAAACAGATCATCGATGCTCTTCTCTCCGACCTCGCCAAGCCACCGCTCGAAACCGTCGTCTACGAGATTGGAATGTTTAAAAACTCATGTGAAGTCATATTGAAGGAATTGAAACAATGGATGAAGCCAGAGAAGGTCAAAACTTCAATATCAACATTTCCTTCTTCAGCTGAAATAGTACCTGAACCACTTGGGGTTGTGTTGGTCATTTCTGCATGGAACTATCCAATTTTGCTGTCTCTTGATCCAGTGGTTGGAGCCATTGCAGCTGGTAATGCTGTGGTTCTAAAACCATCAGAGATTGCTCCAGCAACTTCATTACTGATGGCTAAACTGTTAGCAGAGTACATGGATAACTCATGTGTTAGAGTTGTTGAAGGAGCAGTTGATGAAACAAGTGCACTCTTGGATCAAAAGTGGGACAAGATTTTCTACACAGGTAATGGAAGAGTGGGACGCATAGTCATGACTGCTGCTGCAAAACACCTTACACCTGTTGTTCTGGAGCTTGGAGGAAAATGTCCAGCAGTTGTTGATTCAGATGTCAATTTACAGGTAGCAGCTAGACGCTTAATTTCTGGCAAGTGGGGACTCAACAATGGACAAGCTTGTGTTTCTCCTGATTATGTTATTACAACAAAAGACTTTGCTCCCAAGTTGGTGGAATCTCTGAAGACTGAGTTGGAGAACTTCTTTGGAAAGAATCCGTTGGAATCAAAAGATATATCCAGAATTGTGAATCACAACCACTTTGCTCGCGTAGCGAAGCTCTTGGACGATGAGAAGGTTTCCGACAAGATTATTCATGGAGGTGAAAAGGATGAAAGCAAATTGCGGATTTCTCCCACTTTACTATTGGATGTTCCACATGATTCTCTGATCATGGGTGAGGAGATATTTGGTCCATTGCTTCCCATCATCACGGTGAATAAATTGGAAGAAAGTTTTGATCTGATCAATTCAAGAACAAAGCCTCTGGCTGCATATATATTTACAAACAACAAGAAGCTGAAGGAGCAGTTTGTGAAGAATGTTTCTGCAGGGGGCATGCTTGTCAATGACATTGCCTTACATCTTATTGTTCCCACGTTGCCATTTGGGGGAGTAGGAGACAGTGGAACAGGTTCATACATGGAAGGTTCTCCTTTGAAGCTATTTACTCACAAGAAAGCAGTTCTTTATCGTGGTTTTGGTGGAGACGCATCACTAAGGTATCCACCATACACAGAAACAAAACAGAGGGTGATGAAGGCACTCGTTAGTGGTGGTATTCTTACATCATTGGTGCTCTTTTGGATGGTCCTCCAAGGCTTAATTTGTCCATAA 1482 0.4345 MESLQKKVVFDGEAASMVMKELRGSFRSGKTRSYEWRVSQVKALLKMVTDNEKQIIDALLSDLAKPPLETVVYEIGMFKNSCEVILKELKQWMKPEKVKTSISTFPSSAEIVPEPLGVVLVISAWNYPILLSLDPVVGAIAAGNAVVLKPSEIAPATSLLMAKLLAEYMDNSCVRVVEGAVDETSALLDQKWDKIFYTGNGRVGRIVMTAAAKHLTPVVLELGGKCPAVVDSDVNLQVAARRLISGKWGLNNGQACVSPDYVITTKDFAPKLVESLKTELENFFGKNPLESKDISRIVNHNHFARVAKLLDDEKVSDKIIHGGEKDESKLRISPTLLLDVPHDSLIMGEEIFGPLLPIITVNKLEESFDLINSRTKPLAAYIFTNNKKLKEQFVKNVSAGGMLVNDIALHLIVPTLPFGGVGDSGTGSYMEGSPLKLFTHKKAVLYRGFGGDASLRYPPYTETKQRVMKALVSGGILTSLVLFWMVLQGLICP* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1976 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 442 IPR016162 GO:0016491
Amo04g1976 493 SUPERFAMILY ALDH-like 20 451 IPR016161 GO:0016491
Amo04g1976 493 Pfam Aldehyde dehydrogenase family 25 444 IPR015590 GO:0016491
Amo04g1976 493 PANTHER ALDEHYDE DEHYDROGENASE 3 478 IPR012394 GO:0006081
Amo04g1976 493 PANTHER ALDEHYDE DEHYDROGENASE 3 478 - -
Amo04g1976 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 224 424 IPR016163 GO:0016620
Amo04g1976 493 PIRSF ALDH 3 481 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1976 Amo-Chr4 88472577 88478212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1976 10 484 Aldehyde Dehydrogenase Gene Family AT4G34240 63.579 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1976 K00128 - gmx:100783726 761.525