Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1965 ATGTCCATTTACAAAATTGTTGAACACTTTTTCTTATTATTCTTGTTTATAGGGATAATAGTGTCAGCTCAATTGTCCTCTGATTTTTACTCAACAACATGTCCGAATGTTCTTTCCACCATTAAAACACAAGTAGATTCTGCTGTCAACAACGAACCTCGCATGGGAGCATCCCTCCTTCGTCTCCATTTCCATGATTGCTTTGGGTGTGATGCATCAGTGCTACTAGACGATACATCAAATTTCACAGGAGAAAAGACAGCAGGTCCAAATGCAAATTCAATAAGAGGTTTTGAAGTGATTGATACCATAAAGTCCCAAGTAGAGAGCTTGTGTCCTGGTGTTGTTTCTTGTGCTGATATTCTTGCTGTTGCTGCTAGAGACTCTGTTGTTGCTCTTGGGGGGCCCAGTTGGACAGTGCGATTGGGAAGAAGAGACTCAACGACAGCAAGTTTAAGCTCTGCTAACTCAGATTTGCCAAGTTTCTCGTTCGATCTAAGTCAACTTATTACTGCTTTCTCCAATAAAGGTTTCACAACCCAAGAAATGGTTGCTTTATCAGGAGCTCACACAATTGGGGAAGCAAGATGCTTGACCTTCAGACAAAGAATCTACAACGAGAGTAACATAGATTCCTCGTATGCAACATCATTGCAAGCGAATTGTCCTAGCGTAGGTGATGATAGCAATTTGTCACCAATTGACACCACAACTCCAACAACCTTTGACAATGCTTACTTCAAGAATTTGCAGAGCCAAAAGGGTCTCTTCCACTCCGATCAACAACTCTTCAATGGAGGATCCACCGACTCTCAAGTTACCTCTTATGGCAGCGACGCGCAAACCTTTGCCACTGATTTTGCTAACGCAATGCTTAAAATGGGCAACCTTAGCCCTCTTACCGGCACCACTGGCCAGATTAGAACCAACTGTGCAAAAATCAATTGA 948 0.4241 MSIYKIVEHFFLLFLFIGIIVSAQLSSDFYSTTCPNVLSTIKTQVDSAVNNEPRMGASLLRLHFHDCFGCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGPSWTVRLGRRDSTTASLSSANSDLPSFSFDLSQLITAFSNKGFTTQEMVALSGAHTIGEARCLTFRQRIYNESNIDSSYATSLQANCPSVGDDSNLSPIDTTTPTTFDNAYFKNLQSQKGLFHSDQQLFNGGSTDSQVTSYGSDAQTFATDFANAMLKMGNLSPLTGTTGQIRTNCAKIN* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1965 315 Gene3D - 28 311 - -
Amo04g1965 315 ProSiteProfiles Plant heme peroxidase family profile. 24 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo04g1965 315 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo04g1965 315 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo04g1965 315 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo04g1965 315 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo04g1965 315 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo04g1965 315 CDD secretory_peroxidase 24 314 IPR033905 GO:0004601|GO:0042744
Amo04g1965 315 PANTHER PEROXIDASE 72-RELATED 16 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g1965 315 Gene3D Peroxidase, domain 2 160 294 - -
Amo04g1965 315 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Amo04g1965 315 Pfam Peroxidase 42 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo04g1965 315 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g1965 315 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g1965 315 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g1965 315 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g1965 315 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g1965 315 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g1965 315 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g1965 315 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g1965 315 PRINTS Plant peroxidase signature 289 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g1965 315 PANTHER PEROXIDASE 16 315 - -
Amo04g1965 315 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Amo04g1965 315 SUPERFAMILY Heme-dependent peroxidases 24 315 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1965 Amo-Chr4 88145703 88149060 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1965 20 315 Peroxidase AT5G05340 63.000 1.58e-141 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1965 K00430 - gmx:100815142 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3002 14 127362680 127365289 Amo04g1965 04 88145703 88149060 hybridization