Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1956 ATGGTTTCCAAGGCGGAGAACGTTTTCCATGGAAACAGCAATGGCAATAGTGTTAGTATTGATGAGTTGTTCAAAGCTCAAGCTCACCTGTATAGAGTCATGGCAAGTTACACCTTACCCATGTGTGTCAAGTGGGCTATCGACCTTTCCATACCAAACATCATCCATAACCGCCATTCCCATTCCATTTCCCTCTCCGATCTCGTGTCGGCTCTTAACGCTCCACCACCAAAAACTCAATATGTCCAGCGCATCATGCGCTTGTTGACACACGACGGTATATTTGCCGTCGTGGTCAACGAAGAAAGTAAAGAAGAAGAATATGTTCTTACTCCCACTTCTGAGCTCCTTGTAAAGGGCACTGATCATTGTGTCTCGGCCATGGCCGAGTACATTATTAACCCAACTACGGTCGGATTTTATAATTATTTGGCTAAATGGACTTGCGACGAGAAGGGACAAACAACTGTTGAAACTGCTTTAGGGTCTTCCGCTGGCTACTGGGATTTCATTCATGAAAATCCTAAGGAGTTGAAGATTTTCAACGATGGTATGGAGAGTGATTCTAACGTTGTGAGGTTTGCTTTGAGGGATTGTAAATCGGTGTTTGAAGGGTTGGATTCGTTGGTTGATGTTGGTGGGGCCACTGGTAACACTGCTAAGATCATTTGTGAAGCGTTTCCGAAGCTGAAATGCAGAGTGTTGGATCTTCCACATGTTGTTGCTGGTTTGCCTGAAACTGAAAACTTGAAATTTTTTGGAGGGAGCATGTTTGATTTTATCCCTCATGCTGATGCTATTTTATTCAAGTGGGTTCTGGGCAATTGGAGTGATGATCATTGCATACAAGTCCTAGAAAAATGTAAGGAAGCAATTTCAGGCAAAAGTGGCGGAGGAAAAGTGATTATTATTGACATAGTAATAAATGAAAATGAAGATGAGCATGATGTAATGGAACTAAAACTATTTTCTGATATAGCTGCAATGACTCTTCTTGATGGAAAAGAGAGAGACGAGAAAGATTGGAAAAAACTCTTCTTGAAAGCAGGCTTCAAGAACTACAAAGTGTTTTCCATATTTGGCTTTAGGTCGCTTATTGAGATTTTCAACGATGCTGTGGAGAATTGCAAACCTGTGAGCAACACTGCTAAGATTATTAGTGGGGAATTTCCTAAGATAAAATGCAGTTCTGTAATGCATGATTGGGATGATGATCACTGCAAACAAATCCGAAAAATGCTAAAGCTATTTCGAGGAAAAGCAATGATGGAGGACAACTGA 1281 0.4122 MVSKAENVFHGNSNGNSVSIDELFKAQAHLYRVMASYTLPMCVKWAIDLSIPNIIHNRHSHSISLSDLVSALNAPPPKTQYVQRIMRLLTHDGIFAVVVNEESKEEEYVLTPTSELLVKGTDHCVSAMAEYIINPTTVGFYNYLAKWTCDEKGQTTVETALGSSAGYWDFIHENPKELKIFNDGMESDSNVVRFALRDCKSVFEGLDSLVDVGGATGNTAKIICEAFPKLKCRVLDLPHVVAGLPETENLKFFGGSMFDFIPHADAILFKWVLGNWSDDHCIQVLEKCKEAISGKSGGGKVIIIDIVINENEDEHDVMELKLFSDIAAMTLLDGKERDEKDWKKLFLKAGFKNYKVFSIFGFRSLIEIFNDAVENCKPVSNTAKIISGEFPKIKCSSVMHDWDDDHCKQIRKMLKLFRGKAMMEDN* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1956 426 PANTHER O-METHYLTRANSFERASE 14 369 IPR016461 GO:0008168
Amo04g1956 426 Pfam Dimerisation domain 41 90 IPR012967 GO:0046983
Amo04g1956 426 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 367 IPR029063 -
Amo04g1956 426 SUPERFAMILY "Winged helix" DNA-binding domain 21 121 IPR036390 -
Amo04g1956 426 Pfam O-methyltransferase domain 141 352 IPR001077 GO:0008171
Amo04g1956 426 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 370 IPR016461 GO:0008168
Amo04g1956 426 Gene3D - 12 117 IPR036388 -
Amo04g1956 426 Gene3D Vaccinia Virus protein VP39 118 369 IPR029063 -
Amo04g1956 426 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 14 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1956 Amo-Chr4 87994523 88003120 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1956 32 369 Monolignol Biosynthesis Gene Families AT5G54160 31.214 5.62e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1956 K22588 - gmx:100819853 357.066