Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1936 ATGCCTAGATTGTACTATGACACATTTCATCCCACAATCCACTTTCAGATATCATCATCATCATTATCACTCCCTAAACCAATGATCTCCCGCTGCAGCATAGTCCAATCTCACCACCCCAATTTCACAATCTCATACCTGATTGACTCATGTAGTCTCTCTCCAGACACTGCTGCTCTTACTTCCCAAAAGCTTCACCTTCCTTCTGCTGAAAGACCAGACTCAGTTCTCACCCTTCTCAGGGAGCATGGTTTCACAGATACCCAGATTTCAAACCTCATCAGAAAACGCCTATTGTTTCTCTTAGCAAACCCAGATATCCTCTTGCCAAAGTTTCAATTTTTCCTCTCCATTGGGATTTTCAATACCAACCTCGCAAGAACCCTAACTGCTTATCCAACCCTTTTGAGCCGGAGCTTGGAGAAACAGATCATACCCTGTTACAATTTTCTCAAGAGTGTGTTGATTTCTGATGAAAAGGTTGCATCTTCATTGAAGCGCACATCTTGGGTCTTCCTTGAGGATCACAAGAAGAACCTCGTACCAAACCTCAATCTCCTAAAAGAGATGGATGTTCCTAAATCATGTGTTACGCTGTTGCTGACTCATTTTTCGGAGGCATTGATGCAGAAAAAGAAAAACTTTGCAAAGCTTTCTAAGGAGATTAAAGAAATGGGGTTTAATCCAAAAAATACAATTTTTGTGTTGGCCATTCATGTGCTCTCAGGTGAGGGTAACAAATCCATATATAACCGCTGTTACGAGGTTTATAAGAGGTGGGGTTGGTCCACTTTGGGAGGTGGAAGGAAAGGTGGTCAGGGGTGGAATTGGAGGGAAGGAGGGGATGCGGTGGAGGTGGGAGGAATGAAGGTGAGAGAGAGAAGCAGGAGCAGAGGAGGGAGACGGAAAGGTGGAAGAAGAAGAAATGGTTAA 933 0.4373 MPRLYYDTFHPTIHFQISSSSLSLPKPMISRCSIVQSHHPNFTISYLIDSCSLSPDTAALTSQKLHLPSAERPDSVLTLLREHGFTDTQISNLIRKRLLFLLANPDILLPKFQFFLSIGIFNTNLARTLTAYPTLLSRSLEKQIIPCYNFLKSVLISDEKVASSLKRTSWVFLEDHKKNLVPNLNLLKEMDVPKSCVTLLLTHFSEALMQKKKNFAKLSKEIKEMGFNPKNTIFVLAIHVLSGEGNKSIYNRCYEVYKRWGWSTLGGGRKGGQGWNWREGGDAVEVGGMKVRERSRSRGGRRKGGRRRNG* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1936 310 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 18 263 - -
Amo04g1936 310 Gene3D Transcription termination factor 3, mitochondrial 128 265 IPR038538 -
Amo04g1936 310 SMART mt_12 162 193 IPR003690 GO:0003690|GO:0006355
Amo04g1936 310 SMART mt_12 91 121 IPR003690 GO:0003690|GO:0006355
Amo04g1936 310 SMART mt_12 126 157 IPR003690 GO:0003690|GO:0006355
Amo04g1936 310 Pfam mTERF 77 228 IPR003690 GO:0003690|GO:0006355
Amo04g1936 310 PANTHER CGI-12 PROTEIN-RELATED 18 263 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1936 Amo-Chr4 87468376 87469308 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo04g1936 mTERF 2.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1936 K15032 - ahf:112805356 580.482