Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1929 ATGGCACTGTGCAGCCGAATCAGATCGGGAATTTCAGTCTTCAACAAATTAGCGTTCGCCGCTTCCCAGAGATCCACTCTCCAACGATCTCTCATTGCCCCTTCCAATTCCCTGGTCTCTAGAGGTTATGCCAATGTGCCAGGGGCAAAGGAAGATAAAGTTAAGGTGCCACTGGCTATGTTTGGTGGCTCTGGAAACTATGCCTCTGCTTTGTATATTGCAGCAGTGAAAGCTAATTCAGTCGAAAAGGTTGAGTCCGAGATTCTTCAGTTTGTTGAGGCAGTTAAGAACAGTACTAAAGTTTCCCAGTTCATAAGTGACTTGTCTGTGAAGAAAGATATTAGAGTAAAGGTTATTGAAGACATTGCTGGTCAATCTAAGTTTTCTGATGTTACAAAGAACTTCCTTGTCCTTGTCGCTGAGAATGGGAGGCTTAAAAACATTGAAACTATTGCAAAGAGGTATAGGGAGTTGGCAATGGCATACAAGGGAGAAGTGAAAGCCATTGTGACAACAGTGATTCCTCTTCCTGCCGAGGAAGAGAAGGCACTGAAGGAGACCCTTCAGCAGATGTTAGGCACTGGGGCAAAGGTTCATCTTGAGCAGAAGATTGATCCAAGCATACTTGGTGGATTAGTGTTGGAGTTTAGTCAGAAGGTCTTTGACATGTCTATTAAGACTAGGGCGCAACAGATGGAGAGGCTTCTACGAGAGCCCATCAGTATTGCTGACATATAG 738 0.4444 MALCSRIRSGISVFNKLAFAASQRSTLQRSLIAPSNSLVSRGYANVPGAKEDKVKVPLAMFGGSGNYASALYIAAVKANSVEKVESEILQFVEAVKNSTKVSQFISDLSVKKDIRVKVIEDIAGQSKFSDVTKNFLVLVAENGRLKNIETIAKRYRELAMAYKGEVKAIVTTVIPLPAEEEKALKETLQQMLGTGAKVHLEQKIDPSILGGLVLEFSQKVFDMSIKTRAQQMERLLREPISIADI* 246
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1929 245 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 64 164 IPR026015 -
Amo04g1929 245 PRINTS ATP synthase delta subunit signature 63 82 IPR000711 GO:0015986|GO:0046933
Amo04g1929 245 PRINTS ATP synthase delta subunit signature 133 144 IPR000711 GO:0015986|GO:0046933
Amo04g1929 245 PRINTS ATP synthase delta subunit signature 144 158 IPR000711 GO:0015986|GO:0046933
Amo04g1929 245 PRINTS ATP synthase delta subunit signature 196 211 IPR000711 GO:0015986|GO:0046933
Amo04g1929 245 PRINTS ATP synthase delta subunit signature 211 229 IPR000711 GO:0015986|GO:0046933
Amo04g1929 245 PANTHER ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL 29 238 - -
Amo04g1929 245 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 198 217 IPR020781 GO:0015986|GO:0016020|GO:0046933
Amo04g1929 245 Hamap ATP synthase subunit delta [atpD]. 59 238 IPR000711 GO:0015986|GO:0046933
Amo04g1929 245 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 66 236 IPR000711 GO:0015986|GO:0046933
Amo04g1929 245 Pfam ATP synthase delta (OSCP) subunit 65 235 IPR000711 GO:0015986|GO:0046933
Amo04g1929 245 Gene3D - 63 156 IPR026015 -
Amo04g1929 245 PANTHER ATP SYNTHASE DELTA CHAIN 29 238 IPR000711 GO:0015986|GO:0046933
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo04g1929 Amo-Chr4 87383017 87387695 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1929 79 245 Primary Pumps ATPases AT5G13450 51.744 7.40e-58 180
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1929 K02137 - gmx:100790990 388.652