Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1927 ATGTCATCGACGACTACACCATGCGCTGCATGTAAGTTCCTTCGTCGGAAGTGCACACCGGAGTGCATTTTTGCACCGTACTTCCCAGCGAACAACCCACAGCGCTTCGAATGTGTCCACCGTGTCTTCGGCGCCAGCAACGTCGGCAAGATCCTCAACGAGCTACCTCCATCCCAGCGCGAGGAAGCGGTGGAGTCCCTTGCGTTCGAGGCGGAAGCACGCCAATGCGACCCGGTCTATGGCTGCACCCTCCAAGTCTGCATCCTACAGAAGAAACTCCGCCAGAGACGTGCCCTCCTCGCTAATGCCAAGAGAGAACTTAGCGCCTACATCAACCCACAAGCCATTCAAGGTCCATTCAACCCTCAGGAAAAGCCTCTGTCTTCACCTGCCGACCATTTAGGTCCTCCCTGCAGTCCGAATGTTGTACAGTATTCACCCATTTTAGGCCCATCCTACGGTCTAGATGTTGTACAGTCTTCAGCCCATTTGGGCCTATCTGACTGCCCAGATGATGCACCGTTTTTTATGCCAGCTATACAGCATAATGGGTCATTGGGTGGTGGTGGTGCTGCTGACCCGAAGCTGGACCCAGGGCAGCAAGAGTTGTTGGAGGCCCAGCAACTTGCTGCTGCTGCGGCAATCCGAGAACAGCAGCAAGCTATAATGATGAGGAATTATGTCCAGCAACAGCAACAGGAGTATCTAAGACACAATGCTGCTGCTGGGATTGAACCTGTTGCGGCTGCGGCGGCCCTACGGCGATGTCAGTGGATGTGGAGTGTTTGGCCACATGGGTGCATCTTCAGGTGGTCAAGGAGGTGA 825 0.5467 MSSTTTPCAACKFLRRKCTPECIFAPYFPANNPQRFECVHRVFGASNVGKILNELPPSQREEAVESLAFEAEARQCDPVYGCTLQVCILQKKLRQRRALLANAKRELSAYINPQAIQGPFNPQEKPLSSPADHLGPPCSPNVVQYSPILGPSYGLDVVQSSAHLGLSDCPDDAPFFMPAIQHNGSLGGGGAADPKLDPGQQELLEAQQLAAAAAIREQQQAIMMRNYVQQQQQEYLRHNAAAGIEPVAAAAALRRCQWMWSVWPHGCIFRWSRR* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1927 274 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Amo04g1927 274 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 3 235 - -
Amo04g1927 274 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Amo04g1927 274 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1927 Amo-Chr4 87354058 87354882 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1927 1 116 AS2 family AT5G66870 62.931 6.43e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo04g1927 LOB 4.9e-36 No_clan