Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1926 ATGGAATATGCATCTGGAGGAGAACTGTTTGAGCGAATCTGCAATGCTGGGCGCTTCTCGGAGGATGAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTACTGCCATGCAATGCAAGTTTGTCACCGGGACCTGAAGTTGGAGAACACTTTGCTGGATGGAAGCCCAGCACCACGTTTGAAGATATGTGATTTTGGCTACTCCAAGAAAAGGTCAAAAGGATACTTCATCAGCTATCTAGCAGTGGAAGTGGTGATAATCTGCTTGGGAATTAGAGAGGGTCAAATTTGA 300 0.46 MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKKRSKGYFISYLAVEVVIICLGIREGQI* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1926 99 PANTHER SERINE/THREONINE KINASE 1 76 - -
Amo04g1926 99 ProSiteProfiles Protein kinase domain profile. 1 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1926 99 Pfam Protein kinase domain 1 78 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1926 99 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2I 1 76 - -
Amo04g1926 99 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Amo04g1926 99 SUPERFAMILY Protein kinase-like (PK-like) 1 79 IPR011009 -
Amo04g1926 99 Gene3D Transferase(Phosphotransferase) domain 1 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1926 Amo-Chr4 87350198 87351148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1926 1 71 CBL-interacting serine-threonine protein kinases AT1G30270 57.746 1.91e-22 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Amo04g1926 Pkinase 2.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1926 K14498 - fve:101301056 153.68