Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1873 CTAAAATATGACTATGTAGCTGTCAATCTCTTGAAGGGAGAGCAATTTCATCCCTGGGTCAAAATTGTAGTCTTCCCTGAATTTCTACTCAACCCTGTTGGTTTCGTGCCGGTTCTGGTGGATAACGATCTTGTGCTTGCTGACTCCTTAGCCATTATTATGTATCTGGACGATAAGTATCCTCAACACCTTTTGCTGCCTAGTGATATTCACAAAAGAACAATCAATTTTCAGAATTATATCAGGAAAAAAGTCGGCCCTGACGGAAACTTCCTTGGGTATAAGGTGTCTTTAGAAAGGGCTTCACAGGACCACACGGGAAGATACGCAAGGGGAGATGAAATTTCC 348 0.4224 LKYDYVAVNLLKGEQFHPWVKIVVFPEFLLNPVGFVPVLVDNDLVLADSLAIIMYLDDKYPQHLLLPSDIHKRTINFQNYIRKKVGPDGNFLGYKVSLERASQDHTGRYARGDEIS 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1873 116 PANTHER S-CRYSTALLIN-RELATED 1 79 - -
Amo04g1873 116 PANTHER MALEYLACETOACETATE ISOMERASE 1 79 - -
Amo04g1873 116 SUPERFAMILY Thioredoxin-like 1 67 IPR036249 -
Amo04g1873 116 Gene3D Glutaredoxin 1 80 - -
Amo04g1873 116 Pfam Glutathione S-transferase, N-terminal domain 5 62 IPR004045 -
Amo04g1873 116 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 64 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1873 Amo-Chr4 85986350 85987416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1873 1 115 Glutathione S-transferase Gene Family AT2G02380 38.571 2.93e-23 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1873 K01800 - aip:107640489 120.938