Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1818 CCTTGCACCGCCGTCTCACAAACCTCCATTGCACTCAACTTCTATCGGCCTTGCTCGCATCGCTCCCTTCCGTCGCACCCCTTCCCGGTTCTTCTTCGTCGCACCCCTTCCGTCAGCCTTGCTCCCTTTCGAACCCTAATGTGTGTTTGTCTCTTCGATCTCGCCACTAATGCTTGCTCTTTTCCGTGTGTTGCTGTGTTTCTCTCTTCGATCTTGCCTCAACTGTGCAGGGCATATGATCGAGCTGCGATCAAGTTCCGTGGCATTGATGCATATATCAATTTCAACGTCAGCGATTATGATGAAGATATAAAGCAGAGCACATGTTCTGATATTAATTGGATAAAGTTTTCTTTAATTTTTGAATCTTTCTATTTTGGTTTCTGTTTTTATTTCCTTACTTTTAGTTTTAAGGGTGAAAAAGGCGACATTATACTTACAATTATTACAATGCTATCTAACGCGATTGGCCACTCCATCCTTGGACTGATTCTGATGTTGATCAGTTCATTGCTTTGGATCCTGTTCATGGACCTGCTGTAA 543 0.4346 PCTAVSQTSIALNFYRPCSHRSLPSHPFPVLLRRTPSVSLAPFRTLMCVCLFDLATNACSFPCVAVFLSSILPQLCRAYDRAAIKFRGIDAYINFNVSDYDEDIKQSTCSDINWIKFSLIFESFYFGFCFYFLTFSFKGEKGDIILTIITMLSNAIGHSILGLILMLISSLLWILFMDLL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1818 180 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 77 106 - -
Amo04g1818 180 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 77 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1818 Amo-Chr4 84697501 84699430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1818 76 106 AP2-EREBP Transcription Factor Family AT2G39250 64.516 3.61e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1818 K09284 - aip:107643827 192.586