Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1806 ATGGCCACAGACACTTCTCCGAACTTTCAGGCGGTCATTCCCACTACTGAGTTCCACACAGAACTTTCACTACCAACACCAGATCACGATGGCTTGGAGTTCTGGCAGTACATGGTTGCAGGTTCAATAGCAGGATCAGTGGAGCACATGGCTATGTTCCCAGTTGACACTCTCAAGACCCGCATGCAAGCTCTTACAACAACCACCACCACCACTTCATGCCTCCTCCATCCCTTCCGCCTCCGCCAATCCCTCTCTTCCATCCTCAAACTCGAAGGTCCTTCCTCCCTCTACCGCGGCATCTCCGCCATGGCCCTCGGTGCAGGCCCCGCCCACGCCGTTTACTTCTCCGTCTACGAGTTCTGCAAACAAGCCTTCTCCTCCTCTTTCACCACCAACAATTACTCCTCACTGCTGCATGCCGCTTCTGGTGTCTGCGCTACAGTCACCAGCGACGCCGTTTTCACTCCCATGGACGTCGTGAAGCAGAGGCTTCAGCTGAAGAGCAGTCCGTACAAGGGTGTGGTGGATTGCGTGAGGAGAGTGGCCCTCGAAGAAGGGGTTGCCGCGTTTTTTAAGTCGTATCGGACTACGGTTGTGATGAACGCTCCGTTTACGGCGGTGCATTTTGCGGCGTATGAGGCGACAAAGAAGGGGTTGGTGGAGGTGTCGCCGGAGAGCGCGGATGACAGGAGGTGGGTGGTTCATGCTACCGCTGGTGGTGCTGCCGGAGCCCTGGCTGCTGTTGTCACAACCCCGCTTGATGTTGTCAAAACTCAACTTCAGTGCCAGGGTGTTTGTGGATGTGACAGATTCTCTAGTAATTCAATTGGGCATGTTATTCAAACAGTGATAAGAAAAGATGGATATAGAGGTCTCATGAGAGGTTATGTCCCTAGGATGCTGTTTCATGCCCCTGCAGCTGCAATTTGTTGGTCCACTTACGAGGCATCCAAATCTTTCTTTCACAAACTTAATTAA 981 0.5291 MATDTSPNFQAVIPTTEFHTELSLPTPDHDGLEFWQYMVAGSIAGSVEHMAMFPVDTLKTRMQALTTTTTTTSCLLHPFRLRQSLSSILKLEGPSSLYRGISAMALGAGPAHAVYFSVYEFCKQAFSSSFTTNNYSSLLHAASGVCATVTSDAVFTPMDVVKQRLQLKSSPYKGVVDCVRRVALEEGVAAFFKSYRTTVVMNAPFTAVHFAAYEATKKGLVEVSPESADDRRWVVHATAGGAAGALAAVVTTPLDVVKTQLQCQGVCGCDRFSSNSIGHVIQTVIRKDGYRGLMRGYVPRMLFHAPAAAICWSTYEASKSFFHKLN* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1806 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 32 125 IPR018108 -
Amo04g1806 326 Gene3D Mitochondrial carrier domain 13 199 IPR023395 -
Amo04g1806 326 PANTHER MITOFERRIN-LIKE 1 326 - -
Amo04g1806 326 Pfam Mitochondrial carrier protein 137 221 IPR018108 -
Amo04g1806 326 Pfam Mitochondrial carrier protein 32 128 IPR018108 -
Amo04g1806 326 Pfam Mitochondrial carrier protein 232 324 IPR018108 -
Amo04g1806 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 135 219 IPR018108 -
Amo04g1806 326 Gene3D Mitochondrial carrier domain 200 326 IPR023395 -
Amo04g1806 326 PRINTS Mitochondrial carrier protein signature 37 50 IPR002067 GO:0055085
Amo04g1806 326 PRINTS Mitochondrial carrier protein signature 50 64 IPR002067 GO:0055085
Amo04g1806 326 PRINTS Mitochondrial carrier protein signature 100 120 IPR002067 GO:0055085
Amo04g1806 326 PRINTS Mitochondrial carrier protein signature 150 168 IPR002067 GO:0055085
Amo04g1806 326 PRINTS Mitochondrial carrier protein signature 192 210 IPR002067 GO:0055085
Amo04g1806 326 PRINTS Mitochondrial carrier protein signature 240 262 IPR002067 GO:0055085
Amo04g1806 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 231 321 IPR018108 -
Amo04g1806 326 PANTHER MITOFERRIN-1-RELATED 1 326 - -
Amo04g1806 326 SUPERFAMILY Mitochondrial carrier 30 316 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1806 Amo-Chr4 84483680 84489327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1806 6 326 Chloroplast and Mitochondria Gene Families AT1G07030 65.217 8.61e-147 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1806 K15113 - tcc:18597466 456.447