Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1784 ATGACAAACTCAGGTTGCAATTTACTTGCATTAATGAAGCTTATCTTTGTTGACACTTTGTTTGCCTTAGTCCTCCTAACCGTTATGAGTGCCAACACCATGGTGGCAGCATCAAATTCCTCGTCCTTGAACGAGGAACAAAAGGCCTTGCTCCATAGCGGGTGGACGGAAGGTCGCGACATCTCAAAACATTGTAACTGGACTGGTATTGTGTGCAATGACGCTGGAAGTGTCATAGAGATTTCAACAAGGCGTTATTTTTTTATCCCTCCATCTGAATTGAGGAACTTCAATTTTACTGCATTCCCCAATTTGATCCGTCTAGAACTTACTGGTTTGGAACTCAAGGGAACCATTCCCAGTGAAATAAGCACTCTTACAAAGCTTATGTATCTTGATCTCTCTTCTAACTATCTTGAAGGTGAGTTGCCTACTTCAATTTCAAATCTCACTCAACTTAAGTTAGTTAATGTTGCTAGCAATTTTCTTAGAGGTGTTATTCCTTCCACTTTTGGCCAGTTGAAGCCACCCATTCCCGAAAGGCTAGGGTACTTAAAGCATTTAGAGCAGTTAACTCTGTCAAATAACTCACTGAATGGTTCAATCCCTTCTACCTTTGGACAACTAGAGGATTTGGAATCTTTGTCCCTTGATTCAAACCATATTGAAGGTCCCATCCCTGTAGAATTTGAGAACCTGTTCCATTTGAAAGCTTTAGACCTTTCCCATAACAATATTTCTGGTGTTATACCATCTGGGATTGGACAACTCTCTAGGCTTTCAACTTTAGATATTTCCAACAATAGCCTTAAGGGACCAATTCCATTTGGTATTCTAAATCATTGCAGTTATGTGCAGCTAAGTAACAACTTTTTAAGTGGACATATTCCTTCTCAAATTGGCAATCTTTCTTACCTAGACCTCAGTAATAATAGCCTCTCAGGAAGCATACCAGAGGGACTCCATTCCGTTCCATATCTCAATATATCTTACAATTCCTTTGTTCCAGATACACACTTTTGTGGTTTTCCAAGTGAAGCACTGATTGGTAATAAGCAGTCACCCTCTTGCTCTTCTCCATATAGTACCATAGCACTAGTTTCCCTTGCTGCCTTGAATTACTTCTTCATTACAACAGTGTTCATATGGCTTGGAATCAGTGTCTTCTGTCCCCTCCAAAGAGAGTACGGATTTGAGGAAAGAAGCAAGAATGGGGATATCTTCTCAATTTGGAACTATGATGGTAAAATTGCATTTAAAGACATAATCAAAGCCACAGAAGACTTTGATATAAGGTATTGCATTGGAACAGGTGCTTATGGAAGTGTCTACAAAGCACAGCTTCCTAGTGGCAGAAATGTTGCACTAAAGAAACTTCACAATACAGAGTCTGAAAATCCATCATTTTACAAGAGTTTTAGCAATGAGGTCAAGGTCTTGACAGAAATTCGCCACCGCAACATCATTAGGCTTTATGGTTTTTGTTTGCACAACAGCTGTATGTTTTTGGTGTACAACAGCTGTATGTTTTTGGTGTATGAGTATATGGAAAAGGGAAGCTTGTTCTATAACCTAGCCATTGATGAAGAAGCTCAAGAGACTGCATTTGCTCTCACTCATATGCACCATCATTGCACTCCACCCATTGTCCATCGAGATGTAACTAGTACCAATGTTTTGTTGACTTCAAATTTAGAGGCTTGTCTATCAGATTTTGGTACAGCTAAACTACTTTCTTCTGATTCATCTAATCAAACTCTATTAGCTGGCACTCCCGGATACGTTGCCCCAGTGGTGACTTTGGAAACAATAATGGGAGAACATCCTAAGGAACTACTTTCCAATATGTCAAAACCATCTCCTCCAAAGATCATGATCAAAGATGTATTGGATTCACGTATCCCATTGCCCTTTCTTCGAAAAGACATGCGGGATATTGTACTTGTTCTAACATTAGCATTGGCATGCTTGCATCCCAACCCAAAATCAAGACCTTCAATGCAGGACATAGCTAATGAGCTTTTGTTTTCAAAGTCGCCATTGCTTTGGCATTTTGATGGTATTTCAATTCACCAACTTGTGAATCAAGAAATATACGCAATAGGTAAAAATTAG 2115 0.3943 MTNSGCNLLALMKLIFVDTLFALVLLTVMSANTMVAASNSSSLNEEQKALLHSGWTEGRDISKHCNWTGIVCNDAGSVIEISTRRYFFIPPSELRNFNFTAFPNLIRLELTGLELKGTIPSEISTLTKLMYLDLSSNYLEGELPTSISNLTQLKLVNVASNFLRGVIPSTFGQLKPPIPERLGYLKHLEQLTLSNNSLNGSIPSTFGQLEDLESLSLDSNHIEGPIPVEFENLFHLKALDLSHNNISGVIPSGIGQLSRLSTLDISNNSLKGPIPFGILNHCSYVQLSNNFLSGHIPSQIGNLSYLDLSNNSLSGSIPEGLHSVPYLNISYNSFVPDTHFCGFPSEALIGNKQSPSCSSPYSTIALVSLAALNYFFITTVFIWLGISVFCPLQREYGFEERSKNGDIFSIWNYDGKIAFKDIIKATEDFDIRYCIGTGAYGSVYKAQLPSGRNVALKKLHNTESENPSFYKSFSNEVKVLTEIRHRNIIRLYGFCLHNSCMFLVYNSCMFLVYEYMEKGSLFYNLAIDEEAQETAFALTHMHHHCTPPIVHRDVTSTNVLLTSNLEACLSDFGTAKLLSSDSSNQTLLAGTPGYVAPVVTLETIMGEHPKELLSNMSKPSPPKIMIKDVLDSRIPLPFLRKDMRDIVLVLTLALACLHPNPKSRPSMQDIANELLFSKSPLLWHFDGISIHQLVNQEIYAIGKN* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1784 704 SUPERFAMILY Protein kinase-like (PK-like) 410 677 IPR011009 -
Amo04g1784 704 ProSitePatterns Protein kinases ATP-binding region signature. 435 457 IPR017441 GO:0005524
Amo04g1784 704 Pfam Leucine Rich Repeat 302 323 IPR001611 GO:0005515
Amo04g1784 704 Pfam Leucine Rich Repeat 128 150 IPR001611 GO:0005515
Amo04g1784 704 Gene3D Transferase(Phosphotransferase) domain 1 603 679 - -
Amo04g1784 704 Gene3D Ribonuclease Inhibitor 34 174 IPR032675 -
Amo04g1784 704 ProSiteProfiles Leucine-rich repeat profile. 302 324 IPR001611 GO:0005515
Amo04g1784 704 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 174 700 - -
Amo04g1784 704 Pfam Protein kinase domain 434 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1784 704 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 41 260 - -
Amo04g1784 704 SUPERFAMILY L domain-like 61 335 - -
Amo04g1784 704 PRINTS Leucine-rich repeat signature 257 270 - -
Amo04g1784 704 PRINTS Leucine-rich repeat signature 236 249 - -
Amo04g1784 704 SMART LRR_typ_2 185 208 IPR003591 -
Amo04g1784 704 SMART LRR_typ_2 300 323 IPR003591 -
Amo04g1784 704 SMART LRR_typ_2 126 149 IPR003591 -
Amo04g1784 704 SMART LRR_typ_2 150 173 IPR003591 -
Amo04g1784 704 SMART LRR_typ_2 209 232 IPR003591 -
Amo04g1784 704 SMART LRR_typ_2 233 257 IPR003591 -
Amo04g1784 704 ProSiteProfiles Protein kinase domain profile. 429 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1784 704 Gene3D Transferase(Phosphotransferase) domain 1 516 602 - -
Amo04g1784 704 ProSitePatterns Tyrosine protein kinases specific active-site signature. 549 561 IPR008266 GO:0004672|GO:0006468
Amo04g1784 704 Gene3D Ribonuclease Inhibitor 280 362 IPR032675 -
Amo04g1784 704 Pfam Leucine rich repeat 230 270 IPR001611 GO:0005515
Amo04g1784 704 Pfam Leucine rich repeat 184 222 IPR001611 GO:0005515
Amo04g1784 704 Gene3D Phosphorylase Kinase; domain 1 397 515 - -
Amo04g1784 704 Gene3D Ribonuclease Inhibitor 175 279 IPR032675 -
Amo04g1784 704 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 174 700 - -
Amo04g1784 704 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 41 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1784 Amo-Chr4 83252459 83254932 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1784 99 597 Receptor kinase-like Gene Family AT4G08850 36.622 3.35e-88 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo04g1784 Pkinase 6.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1784 - - adu:107475713 1314.29