Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1783 ATGGCTATATCATGCACTTGCACTATTATTTTGATGTTAGTGCCACTTGTCTTTGTTGGCATCACCACCAATGCTGGAACTCACAAATTGTCACCCTTGGATCAAGAAGCCAATGCTATGCTTTCAATTAGTAAAGAGTTGTGGAGTAACCAACATAATAATGTCTCAAACCGTTGCAACTGGCCCGGAGTCAACTGCAACAAAGCTGGAAGTATAACATTGCTTTCACCTCCAACTCCAAGTAATTTCACCTTCGAGTTCAGGACACAACTCTGCTTTTTGAAACTAAACTTTTCAGTGTTTCAAAATCTAGTCCATCTAGATCTCAGTGAAATGGGGTTATGTGAGTTCCCTAAACTAAGTGGTCTCAAGAAGCTACAACATCTCAACCTATCATACAACACTTTTGCAGGTGAGCTTCCTTTTACATTATTGGAAAATCTAACTCAACTTGTGGTGTTGGACATTTCTAACAATTATATTAGTGGTACAATTCCACAAGAACTAAGCAAGCTGGAGAGACTTGTCATGTTGGACTTGAGTGTTCCTTTCACATTGCCAAATCTAACTCAACTTCTTGTGTTGGACCTTTCCCAAAACAAACTTAGTGGCTTCATTCCTCATGAAATAGGGAAATTAACAAATTTATTAACCTTAGACCTGAGTTCAAATTCCCTGTCTGGTCCAATTCCTGAGCAAATTGGGTACTTGAAACGTTTGACAAGTCTCCACCTTCATTCAAATTTGCTTAGTGGTTTCATTCCTCATGAAATAGGGAAATTAACAAATTTATTAACCTTAGACCTGAGTTCAAATTTCTTGTCTGGTCCAATTCCTGAGCAAATCGGGTACTTGACCCGTTTGGAAGTGCTCACCATCGGATCCAACAGGATAGATGGTTGTATCCCCAAAGAAATAGAGCTTTTGTTGCATCTAGAAGTTTTAAATCTTTGTTATAATGCTATTTCTGGTGTTATCCCATCTTCTATCTTTATTCACTCTAGTTATGTGGATCTAAGCAATAACAATTTAAGTGGAAGCATTCCTTCTCAAATTGGAAACGTTTCATATTTAGACCTTCGTTACAATAACCTTAGTATCAAAAATACAAAGGAACTTGAGTCTATTATTCCATTCTACGACCATCATAATAAGCATTTTGGCCGATCACTGGTTTTGGTCATAATCGTGGTCTGCGTTACCATTTCATTGGGTTCTGTTGGGATTGGAATATGCATTTTCCGTGCCAGGCATCATGGCAAGCTTGAAAATAAGGCCACAAAAAATGGAGACTTGTTCTCAATTTGGAACTATGATGGCAAAATTGCATTTGAGGACATCATTGAAGCAACAGAGGACTTTGATATCAGATATTGCATTGGAACCGGTGCTTATGGTAGCGTCTACGAAGCGCGACTTCCAAGTGGCAAAACTGTTGCATTGAAGAAGCTTCACAAAACAGAATCAAAAAATCCATCCTATTACAAGAGCTTCTGCAATGAAGTTGAGGTCTTGACAGAGATTCGCCACCGCAACATCATTAGGCTTTATGGCTATTGTTTGCATAACAGATGCATGTTTTTGGTGTATGAATACTTGGAAAGAGGAAGCTTGTTCTGTAACTTGGCCAATGAGATGGAAGCACAAGAGTTGAAGTGGAGCAAGAGGGTGAATATCATCAAAGGGACAGCTTATGCTCTTGCTCACATGCATCATCACTGTCCTTCTCCTATTGTTCATCGAGATGTCAGCAGCAACAATGTTCTGCTAAATTCAGAGTTAGAAGCTTGTGTCTCAGATTTCGGCACAGCGAGACTTCTTGATCCTGATTCATCTAACCAAACTCTTTTAGTTGGCACTTATGGATATATTGCTCCAGAATTGGCATACACCATGAGTGTGACTACAAAATGTGATGTTTATAGTTTCGGAGTGGTGGCATTAGAAACAATGATGGGTCATCACCCAGGAGAATTCATGTCCACTATGTCAAAGCCATCTACTCAACAATTATTGGTAAAAGATGTGTTGGATCCGCGGATTCCACTTCCGAAATCTCGGAAAGATATGCAAGATGTTGTGCATGTTGTAAAGCTAGCATTAGCATGCCTCTCCTCTGACCCAAAATCCAGACCATCAATGCAGGATGTGGCTAATGAGTTTTCAGCTTCCAAGGCTTCAATGAATTCTTCTTTTTTTGATGTCTCAATCTACCAATTGAAGCATTAG 2229 0.3934 MAISCTCTIILMLVPLVFVGITTNAGTHKLSPLDQEANAMLSISKELWSNQHNNVSNRCNWPGVNCNKAGSITLLSPPTPSNFTFEFRTQLCFLKLNFSVFQNLVHLDLSEMGLCEFPKLSGLKKLQHLNLSYNTFAGELPFTLLENLTQLVVLDISNNYISGTIPQELSKLERLVMLDLSVPFTLPNLTQLLVLDLSQNKLSGFIPHEIGKLTNLLTLDLSSNSLSGPIPEQIGYLKRLTSLHLHSNLLSGFIPHEIGKLTNLLTLDLSSNFLSGPIPEQIGYLTRLEVLTIGSNRIDGCIPKEIELLLHLEVLNLCYNAISGVIPSSIFIHSSYVDLSNNNLSGSIPSQIGNVSYLDLRYNNLSIKNTKELESIIPFYDHHNKHFGRSLVLVIIVVCVTISLGSVGIGICIFRARHHGKLENKATKNGDLFSIWNYDGKIAFEDIIEATEDFDIRYCIGTGAYGSVYEARLPSGKTVALKKLHKTESKNPSYYKSFCNEVEVLTEIRHRNIIRLYGYCLHNRCMFLVYEYLERGSLFCNLANEMEAQELKWSKRVNIIKGTAYALAHMHHHCPSPIVHRDVSSNNVLLNSELEACVSDFGTARLLDPDSSNQTLLVGTYGYIAPELAYTMSVTTKCDVYSFGVVALETMMGHHPGEFMSTMSKPSTQQLLVKDVLDPRIPLPKSRKDMQDVVHVVKLALACLSSDPKSRPSMQDVANEFSASKASMNSSFFDVSIYQLKH* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1783 742 SUPERFAMILY Protein kinase-like (PK-like) 435 719 IPR011009 -
Amo04g1783 742 ProSitePatterns Tyrosine protein kinases specific active-site signature. 578 590 IPR008266 GO:0004672|GO:0006468
Amo04g1783 742 ProSitePatterns Protein kinases ATP-binding region signature. 460 482 IPR017441 GO:0005524
Amo04g1783 742 SMART LRR_typ_2 148 172 IPR003591 -
Amo04g1783 742 SMART LRR_typ_2 261 285 IPR003591 -
Amo04g1783 742 SMART LRR_typ_2 213 237 IPR003591 -
Amo04g1783 742 SMART LRR_typ_2 123 147 IPR003591 -
Amo04g1783 742 SMART LRR_typ_2 189 212 IPR003591 -
Amo04g1783 742 SMART LRR_typ_2 309 333 IPR003591 -
Amo04g1783 742 Gene3D Phosphorylase Kinase; domain 1 416 532 - -
Amo04g1783 742 SUPERFAMILY L domain-like 42 366 - -
Amo04g1783 742 Pfam Leucine rich repeat 239 298 IPR001611 GO:0005515
Amo04g1783 742 Gene3D Transferase(Phosphotransferase) domain 1 533 736 - -
Amo04g1783 742 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 249 741 - -
Amo04g1783 742 ProSiteProfiles Protein kinase domain profile. 454 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1783 742 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 40 256 - -
Amo04g1783 742 PRINTS Leucine-rich repeat signature 213 226 - -
Amo04g1783 742 PRINTS Leucine-rich repeat signature 192 205 - -
Amo04g1783 742 Pfam Protein kinase domain 459 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1783 742 Gene3D Ribonuclease Inhibitor 33 182 IPR032675 -
Amo04g1783 742 Gene3D Ribonuclease Inhibitor 183 277 IPR032675 -
Amo04g1783 742 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 249 741 - -
Amo04g1783 742 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 40 256 - -
Amo04g1783 742 Gene3D Ribonuclease Inhibitor 278 378 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1783 Amo-Chr4 83247073 83249518 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1783 125 626 Receptor kinase-like Gene Family AT4G08850 40.000 2.10e-110 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo04g1783 Pkinase 4.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1783 - - ahf:112728721 1341.25