Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1780 ATGGGTGCTTGTTGGAGCAACCGGATTAAGGCTATTAATCCTTCCAACACAGGGTTCACTTCTAGAAGTGTCAGCAGGAATGGACATGACATCAGTTCAAGTAGCAGGAACTCCTCTGCCTCCATAACTGTCCCTCCTCGAAGTGAGGGTGAGATATTACAGTCATCTAATTTGAAAAACTTCAGCTACAATGAACTAAGAGCCGCCACAAAGAATTTCCGGCCGGATAGTGTCTTAGGCGAGGGAGGGTTTGGTTCAGTTTTTAAGGGATGGATTGATGAGCATTCACTGGCTGCTACAAAACCAGGCATAGGAATGATTGTTGCCGTGAAGAGGCTTAACCTAGATGGGCTCCAGGGTCACAAGGAATGGTTGGCTGAAATCAACTATCTGGGGCAACTTCAGCATCCTAATCTTGTCAAGTTGATAGGATACTGCTTGGAGGATGACCACCGGCTTCTGGTTTATGAATTTATGCCTAAGGGTAGCGTCGAGAATCATCTGTTCAGAAGAGGTTCCTATTTCCAGCCATTCTCTTGGAATTTGCGAATGAAAATTGCTCTTGGGGCTGCACGAGGTCTTGCTTTTCTTCATAGTCCTGAAGTTCAAGTCATATACCGCGACTTTAAGACTGCAAACATCCTCCTTGATACTAATTACAATGCCAAACTTTCTGATTTTGGGTTGGCCAGAGATGGTCCAACAGGTGATAGAAGCCATGTCTCTACTCGGGTCATGGGAACACGGGGATATGCGGCGCCAGAGTATCTAGCAACAGGTCACCTCACCTCTAAGAGTGATGTGTATAGTTTTGGAGTAGTTCTTCTCGAAATGATATCGGGGAGAAAAGCAATAGACAAGAACCAACCAACTGGAGAGCACAACTTAGTTGAATGGGCCAAGCCTTATCTGTCTAATAAACGCAGAGTTTTTCGTGTAATGGATCCTCGTCTTGAAGGCCAATATTCCCAGAGTCGAGCACAGGCAGCAGCCGCCCTTGCAATGCAATGTCTTGCGGTTGAGCCTAAGGCCAGGCCGAATATGGACGAAGTGGTAAAAGCATTGGAGCAGCTTCAGGAATCAAAAGACTCGCACAAAAGAAGCACTAATCCGAAAGAGCATCACACGCGTGGTTCCAGCCATCTCAATGGCCGTCATGCTCCTGGCAAAGGCAGTGCAGATGCTCCCAAAATGGCCTCGGCTTATCCACGGCCCTCAGTTTCTCTTCTTCAGTGA 1236 0.4701 MGACWSNRIKAINPSNTGFTSRSVSRNGHDISSSSRNSSASITVPPRSEGEILQSSNLKNFSYNELRAATKNFRPDSVLGEGGFGSVFKGWIDEHSLAATKPGIGMIVAVKRLNLDGLQGHKEWLAEINYLGQLQHPNLVKLIGYCLEDDHRLLVYEFMPKGSVENHLFRRGSYFQPFSWNLRMKIALGAARGLAFLHSPEVQVIYRDFKTANILLDTNYNAKLSDFGLARDGPTGDRSHVSTRVMGTRGYAAPEYLATGHLTSKSDVYSFGVVLLEMISGRKAIDKNQPTGEHNLVEWAKPYLSNKRRVFRVMDPRLEGQYSQSRAQAAAALAMQCLAVEPKARPNMDEVVKALEQLQESKDSHKRSTNPKEHHTRGSSHLNGRHAPGKGSADAPKMASAYPRPSVSLLQ* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1780 411 Pfam Protein kinase domain 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1780 411 SUPERFAMILY Protein kinase-like (PK-like) 50 361 IPR011009 -
Amo04g1780 411 MobiDBLite consensus disorder prediction 358 380 - -
Amo04g1780 411 Coils Coil 348 368 - -
Amo04g1780 411 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1780 411 MobiDBLite consensus disorder prediction 358 411 - -
Amo04g1780 411 PANTHER OS01G0588500 PROTEIN-RELATED 22 393 - -
Amo04g1780 411 PANTHER KINASE 1B 22 393 - -
Amo04g1780 411 MobiDBLite consensus disorder prediction 16 46 - -
Amo04g1780 411 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Amo04g1780 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Amo04g1780 411 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Amo04g1780 411 Gene3D Transferase(Phosphotransferase) domain 1 159 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1780 Amo-Chr4 83139993 83143727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1780 51 363 Glycoside Hydrolase AT3G07070 51.592 9.94e-107 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Amo04g1780 Pkinase 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1780 - - gmx:100819620 692.96