Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1774 ATGGCTACCGCTACTGAGAAAGCCATTGGCATCGATTTCGGCACCATTTACAGCTGCGTGGCTGTGTGGCAGAACAACCTCATAGAGATCATCGCTAACGACCAAGGCAACCAAACCACTCCTTCCTATGTTGCCTTCACGGACACCGAGCGCCTCATCGGAGATGCTACCAAGAACCAGGTGGCAATGAACCCATAG 198 0.5253 MATATEKAIGIDFGTIYSCVAVWQNNLIEIIANDQGNQTTPSYVAFTDTERLIGDATKNQVAMNP* 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1774 65 Pfam Hsp70 protein 8 65 IPR013126 GO:0005524|GO:0140662
Amo04g1774 65 SUPERFAMILY Actin-like ATPase domain 7 65 IPR043129 -
Amo04g1774 65 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 4 65 - -
Amo04g1774 65 Gene3D - 1 65 - -
Amo04g1774 65 PRINTS 70kDa heat shock protein signature 57 65 - -
Amo04g1774 65 PRINTS 70kDa heat shock protein signature 35 47 - -
Amo04g1774 65 PRINTS 70kDa heat shock protein signature 7 20 - -
Amo04g1774 65 PANTHER HEAT SHOCK PROTEIN 70KDA 4 65 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1774 Amo-Chr4 82901437 82901634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1774 1 65 Calmodulin-binding Proteins AT1G16030 80.000 8.79e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1774 K03283 - cpap:110815703 112.849